Gene Shewana3_0066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0066 
Symbol 
ID4478002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp76921 
End bp78405 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content47% 
IMG OID639724586 
Productsucrose phosphorylase 
Protein accessionYP_867717 
Protein GI117918525 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0366] Glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000218626 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAATC AAGTGCAATT GATCACCTAT GTCGATCGGA TAACCGGTGC CGGACTCAAA 
CAACTCAAAG CCTTACTCGA TAATGAGTTA GATGGTTTAT TTGGGGGCGT TCATCTACTG
CCATTTTACT ATCCCATCGA TGGCAGCGAT GCAGGGTTTG ATCCCATAGA CCATGTACAA
GTGGACTCAC GCTTAGGTGA TTGGGACGAT GTCAAAAGCA TAGGCGAAGC GTTCGACATC
ATGGCCGACT TGATCGTTAA CCATATGTCC GCAGAATCTC CCGAGTTTAA AGATGTGCTC
AAACATGGCA AACAATCGGT TTACTGGGAT TTATTCCTGA CCAAGGACAA GGTATTCCCA
GAGGGATTAA GTGAACAGGA TCAAAAAGCT ATCTATCGCC CCCGCCCAGG AAGCTGCTTT
AGCACTTACA CCTTAGCGGA TGGTTCAACG GAAGAATTTT GGACCACCTT TACCCGTAAC
CAGATCGATA TCGATGTTAA CTCAGCTGCA GGTAAGGATT ATTTAAACCG CGTATTGGCG
CGATTTAACC ACAGCAAAGT CAATTTAATC CGCTTAGATG CCGCAGGTTA TGCGATAAAA
AAACCCGGCA CTAGCTGCTT TATGATTGAG GAATCCTTCG AGTTTGTGGA TAAATTAGCG
AAACAGGCCA ATGAGTTAGG TATGACAACC CTAGCCGAAA TCCACTCCCA TCATATGACG
CAAATCGATA TCGCCAAACG AGTGGACATG GTTTACGACT TCGCCCTGCC ACCGCTCATC
CTGCACACGC TGTTTAGCCA AGATTGTAGC GCCCTGAGTC ACTGGCTAGA CATGGCCCCT
CGCAACTGCA TTACCGTTCT CGATACCCAC GATGGCATTG GTATTATCGA TGTCGGCCCA
ATGGATGGCT TACGCGGATT ATTGAACGAA AAACAAATCG ATAATCTGGT CGAAACCATA
CACGGCAACA GTCAAGGCGA GAGTCTACAA GCCACTGGGG CGGCCGCCAG CAATGTCGAT
TTGTATCAAA TCAACTGCAC CTATTACGAT GCCCTAGGGC AAAATGATCT AGATTACTTG
ATGGCGCGAG CAATTCAGTT TTTCGCACCG GGTATTCCTC AGGTCTACTA CACAGGCCTG
CTTGCCATAC CAAACGACAT GACGTTGCTG AATCAAACCC ACGTCGGCCG AGACATTAAT
CGCCCCTATT TAAACCGGGA AAAAGTGCAA CAAGCCCTGC AAAAACCTGT GGTTAAAGCC
CTCATCCAAT TGATTAAACT GCGTAATAAT AGCGCAGCAT TCAATGGCCG CTTTTCGATG
GCTGCAAGTG GAAAAACACT AACTCTCACA TGGTCTGCAC AAAATGCATC GGCCAGTCTT
AGTCTCGACT TTGCCCATAA ACAAGGGCTG ATCACCCTAC TTGATGAGCA AGGCATCGAA
ACCCAAATCG CATTAGCAGA CCTGCTCACT CAAGCACAGG CCTAA
 
Protein sequence
MKNQVQLITY VDRITGAGLK QLKALLDNEL DGLFGGVHLL PFYYPIDGSD AGFDPIDHVQ 
VDSRLGDWDD VKSIGEAFDI MADLIVNHMS AESPEFKDVL KHGKQSVYWD LFLTKDKVFP
EGLSEQDQKA IYRPRPGSCF STYTLADGST EEFWTTFTRN QIDIDVNSAA GKDYLNRVLA
RFNHSKVNLI RLDAAGYAIK KPGTSCFMIE ESFEFVDKLA KQANELGMTT LAEIHSHHMT
QIDIAKRVDM VYDFALPPLI LHTLFSQDCS ALSHWLDMAP RNCITVLDTH DGIGIIDVGP
MDGLRGLLNE KQIDNLVETI HGNSQGESLQ ATGAAASNVD LYQINCTYYD ALGQNDLDYL
MARAIQFFAP GIPQVYYTGL LAIPNDMTLL NQTHVGRDIN RPYLNREKVQ QALQKPVVKA
LIQLIKLRNN SAAFNGRFSM AASGKTLTLT WSAQNASASL SLDFAHKQGL ITLLDEQGIE
TQIALADLLT QAQA