Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0019 |
Symbol | |
ID | 4479437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 22574 |
End bp | 25762 |
Gene Length | 3189 bp |
Protein Length | 1062 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639724535 |
Product | amidohydrolase |
Protein accession | YP_867670 |
Protein GI | 117918478 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000000934915 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTGAAAC CTAAGCTGAC ACCGCTTTAT ATCGCCCTGA TGCTTGGCCT TAGTTCCCAC ACAGTACAGG CAACAGACGC CCAAAAAGCC AGTTGGAACG TCAATGCGCC AGCCAATGCC CCTCTAGAAA AAGTGACCAT AGATGTAACC GAAGGCACTT GGATGAACAT CAGTGTCAGC CCAGATGGTA AACATTTAGT GTTTGATTTA CTGGGTGATA TTTATCAAAT CCCAGTCACG GGTGGCGAAG CAAAACCATT AGCCCAAGGC ATCGCCTGGC AAATGCAGCC CGTGTATAGC CCGGATGGTA AGCATATTGC CTTTACCTCA GATGCGGATG GTGGCGACAA TATTTGGATT ATGGATGCCG ATGGTAGCAA TCCACGCACA GTCACGACAG AGACCTTTCG TTTACTTAAC AGTCCTGCGT GGAGCCCTGA TTCGGAATAT TTAGTCGGTC GTAAGCATTT TACCGCCAGT CGGAGCTTAG GCGCTGGTGA AGTCTGGCTC TACCATGTCG CTGGTGGCGA AGGTGTTAAA CTCACCGAAC GTCCTAACGA TGAAAAGGAT TTAGGGGAGC CAGCCTATTC ACCCGATGGC CGTTACATTT ACTTCAGCCA AGATGACACT CCTGGCAAAA CCTTCCATTA TTCTAAGGAT TCAGTAAACG GCATCTATAA AATCAAGCGT TATGATACCC AAACGGGTGA TATCGAAATC TTGATCGAAG GAACCGGTGG CGCCATTCGT CCAACACCGA GCCCTGACGG CACCAAACTG GCGTACATCA AGCGAGATGA TTTCCAATCC TCCTTGTATT TGCTCGATTT GAAATCCGGC GAAACCACTA AGCTGTATGG CGATTTAGAG CGCGATATGC AAGAGACGTG GGCAATACAC GGTGTCTATC CCACCATGGC TTGGACCCAA GATAACAAAG ATATTTTTTT CTGGGCTAAG GGCAAAATCA ATCGCCTGAA TGTTGCCAAT AAAACGGTCA CCAACATTCC CTTCAGCGTA AAAACCCAGT TAGATGTGCA GCCTTCAGTA CGCTTTAAAC AAGATATTGA TAAGGATGTA TTCGACGTAA AAATGCTACG AATGACACAA GTTTCACCGG ATGGCAGCAA AGTCGCCTTC GAAGCATTGG GTAAAATCTG GTTGAAGACA CTTCCCGATG GCAAGATGAC ACGCTTAACT GAGTTAGGTA ACGACATTGA AGAGCTCTAT CCCCAGTGGT CGCGTGATGG CAAAAATATT GTCTTCACAA CTTGGAATGA CCAAGACCAG GGCACAGTAC AAGTGATCAG TGCAAAAGGT GGCAAAGCGA AACAACTTAC CACTGAGACA GGCAAATACG TTGAGCCCAC CTTCTCACCC AATGGTGAAC TGGTAGTGTA TCGCAAAACC CAAGGTGGAC ACCTTACACC TCGTACTTGG TCGCAGGAAC CCGGCCTGTA CAAGGTCGAT TTAAAAACCA AACAAAATAA GAAAATTAGC GCTGAGGGTT ATCAAGCACA ATTCGGCGCT TCGGCCGATC GCATTTTCTT TATGAACACA GGTGATAACG ACACGCCACA GCTTGCCTCA ATTAACCTAG ATGGGTTTGA TAAACGCGTT CACTACAGCA GTAAGCATGC AACCGAATTT AGAGTATCTC CCGACGGCGA ACAACTGGCC TTTGCCGAAC GTTTTAAAGT TTGGGTCACC CCCTTCGCTA AACATGGTGA AACCGTTGAA ATCGGCCCTA ACGCCAGCAA TCTTCCTGTT ACTCAATTAA GTGTGCGGGC CGGCGAAAGT ATCAGCTGGA ATAGTAAGAG TAACCAACTC TATTGGACTC TTGGCCCAGA ACTGTACCAA GCCAATGTGG ATTCCCAGTA TCTTAAAAAG GACGAGCAAG CTAAGCCAAG TATTATCAAC TTGGGCTTTA CCGAAACGGC CGATGTTCCA CGTGGAACAG TCGCCTTTGT CGGCGGCAAA GTGATCACCA TGGAAAATGA CCAAGTCATC GATAAAGGTG TGGTCATAGT CAAAGACAAT CATATTTTAA CCGTTGGCGA TGCAAACACG GCAATTCCAA AGGATGCGCA AGTTATCGAA ATTAGTGGCA AATCCATTAT GCCAGGCTTG TTTGATGCTC ATGCCCACGG TGCACAGGCC GATGATGAAA TCGTGCCACA ACAAAACTGG GCACTCTACT CTGGCTTATC CCTAGGCGTG ACAACCATCC ATGATCCGTC AAACGATACT ACTGAGATAT TTGCTGCCTC TGAACAGCAA AAGGCTGGTC ACATCGTTGG TCCACGGATT TTCTCCACTG GAACGATTCT TTATGGCGCC AATGCTCCCG GCTACACCTC ACATATAGAC TCACTCGATG ATGCGAAATT CCATTTAGAA CGACTCAAAA AAGTCGGCGC CTTTAGTGTT AAAAGCTACA ATCAACCTCG TCGTAATCAA AGACAACAGG TTATCGCCGC CGCTCGCGAA CTCGAAATGA TGGTTGTGCC TGAGGGTGGC AGCTTGCTGC AACATAACCT AACCATGGTT GCCGATGGCC ATACAACCGT TGAGCACTCG TTACCCGTGG CGAGTATTTA TAACGATATT AAACAGTTCT GGAGCCAAAC TAAGGTCGGT TACACTCCAA CCTTAGTCGT CGCCTACGGC GGTATTTCGG GTGAAAACTA TTGGTACGAT AAAACCGATG TGTGGGCACA TCCACGTTTG TCTATGTATG TGCCAAGCGA TATTTTGCAG GCTCGCTCAA TGCGTCGCCC CCATGCACCA GACAGTCACT ACAACCACTT CAATGTTGCT AAAGTGGCGA ATGAGTTTAA TAAATTAGGC ATTCATCCAA ATATTGGCGC CCACGGTCAG CGTGAGGGTT TAGCCGCACA TTGGGAAATG TGGATGTTCG CCCAAGGCGG CATGAGCAAT ATGGATGTAC TGAAAACTGC AACCATCAAC CCTGCCACCA CCTTCGGTCT AGAGCATCAA CTTGGCTCAA TCAAAACCGG TAAGCTTGCA GACTTAATCG TTATTAATGG CGACCCATTA GCGGATATTC GAGTCACAGA TAAAGTCACT TATACTATGG TCAATGGTAA GTTGTTTGAT GCTGAGTCGA TGAACCAGCT GAATGGTAAC AAACAACAGC GTAAGCCATT CTTCTTCGAG AAAATCTAA
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Protein sequence | MLKPKLTPLY IALMLGLSSH TVQATDAQKA SWNVNAPANA PLEKVTIDVT EGTWMNISVS PDGKHLVFDL LGDIYQIPVT GGEAKPLAQG IAWQMQPVYS PDGKHIAFTS DADGGDNIWI MDADGSNPRT VTTETFRLLN SPAWSPDSEY LVGRKHFTAS RSLGAGEVWL YHVAGGEGVK LTERPNDEKD LGEPAYSPDG RYIYFSQDDT PGKTFHYSKD SVNGIYKIKR YDTQTGDIEI LIEGTGGAIR PTPSPDGTKL AYIKRDDFQS SLYLLDLKSG ETTKLYGDLE RDMQETWAIH GVYPTMAWTQ DNKDIFFWAK GKINRLNVAN KTVTNIPFSV KTQLDVQPSV RFKQDIDKDV FDVKMLRMTQ VSPDGSKVAF EALGKIWLKT LPDGKMTRLT ELGNDIEELY PQWSRDGKNI VFTTWNDQDQ GTVQVISAKG GKAKQLTTET GKYVEPTFSP NGELVVYRKT QGGHLTPRTW SQEPGLYKVD LKTKQNKKIS AEGYQAQFGA SADRIFFMNT GDNDTPQLAS INLDGFDKRV HYSSKHATEF RVSPDGEQLA FAERFKVWVT PFAKHGETVE IGPNASNLPV TQLSVRAGES ISWNSKSNQL YWTLGPELYQ ANVDSQYLKK DEQAKPSIIN LGFTETADVP RGTVAFVGGK VITMENDQVI DKGVVIVKDN HILTVGDANT AIPKDAQVIE ISGKSIMPGL FDAHAHGAQA DDEIVPQQNW ALYSGLSLGV TTIHDPSNDT TEIFAASEQQ KAGHIVGPRI FSTGTILYGA NAPGYTSHID SLDDAKFHLE RLKKVGAFSV KSYNQPRRNQ RQQVIAAARE LEMMVVPEGG SLLQHNLTMV ADGHTTVEHS LPVASIYNDI KQFWSQTKVG YTPTLVVAYG GISGENYWYD KTDVWAHPRL SMYVPSDILQ ARSMRRPHAP DSHYNHFNVA KVANEFNKLG IHPNIGAHGQ REGLAAHWEM WMFAQGGMSN MDVLKTATIN PATTFGLEHQ LGSIKTGKLA DLIVINGDPL ADIRVTDKVT YTMVNGKLFD AESMNQLNGN KQQRKPFFFE KI
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