Gene Shewana3_0018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0018 
Symbol 
ID4479436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp21913 
End bp22488 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content45% 
IMG OID639724534 
ProductDNA-3-methyladenine glycosylase I 
Protein accessionYP_867669 
Protein GI117918477 
COG category[L] Replication, recombination and repair 
COG ID[COG2818] 3-methyladenine DNA glycosylase 
TIGRFAM ID[TIGR00624] DNA-3-methyladenine glycosylase I 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000168083 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAGAAA TCCGCTGTAA TTGGGTCAGT GATGATCCCT TGTATCGCGA GTACCACGAT 
AAGGTGTGGG GGCGCCCAGT TTATGATTCG AAGGAGTTGT TTGCCAAGCT CTGTTTAGAT
GGGCAACAAG CTGGGTTGTC TTGGATTACT ATCTTAAAGA AGCAGCAAAA CTACGAACAA
GCCTTTGCGG ATTTTGAGCC AGCAGTGATT GCAACTTTTG ACGACGCTAA AGTCGAGGAG
TTGATGGCTA ACCCAGGCAT TGTGCGTAAT CGCCTTAAGA TCCATTCGAT TATTCGTAAT
GCAAAAGGTT ACTTAGCCTA CACTGCGGAT GGCAAAGATT TTGCTGAATT TCTGTGGAGC
TTTGTTGGTG GCAAGCCATT GGTGAATCAA TTTACCTCCA TGTCGCAGGT GCCTGCGCAA
ACACCTGAAT CAGAGGCAAT GTCTAAGGCA TTAAAAAAGC TTGGCTTTAA CTTTGTTGGT
CCGACGATTT GTTATGCTTT TATGCAGGCG GTGGGGATGG TGAACGATCA TCTAGTTGAT
TGCATTGCCT ATGATGCTTG CTGTGGCGGC AAATAA
 
Protein sequence
MEEIRCNWVS DDPLYREYHD KVWGRPVYDS KELFAKLCLD GQQAGLSWIT ILKKQQNYEQ 
AFADFEPAVI ATFDDAKVEE LMANPGIVRN RLKIHSIIRN AKGYLAYTAD GKDFAEFLWS
FVGGKPLVNQ FTSMSQVPAQ TPESEAMSKA LKKLGFNFVG PTICYAFMQA VGMVNDHLVD
CIAYDACCGG K