Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0018 |
Symbol | |
ID | 4479436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 21913 |
End bp | 22488 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639724534 |
Product | DNA-3-methyladenine glycosylase I |
Protein accession | YP_867669 |
Protein GI | 117918477 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2818] 3-methyladenine DNA glycosylase |
TIGRFAM ID | [TIGR00624] DNA-3-methyladenine glycosylase I |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000000168083 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAAGAAA TCCGCTGTAA TTGGGTCAGT GATGATCCCT TGTATCGCGA GTACCACGAT AAGGTGTGGG GGCGCCCAGT TTATGATTCG AAGGAGTTGT TTGCCAAGCT CTGTTTAGAT GGGCAACAAG CTGGGTTGTC TTGGATTACT ATCTTAAAGA AGCAGCAAAA CTACGAACAA GCCTTTGCGG ATTTTGAGCC AGCAGTGATT GCAACTTTTG ACGACGCTAA AGTCGAGGAG TTGATGGCTA ACCCAGGCAT TGTGCGTAAT CGCCTTAAGA TCCATTCGAT TATTCGTAAT GCAAAAGGTT ACTTAGCCTA CACTGCGGAT GGCAAAGATT TTGCTGAATT TCTGTGGAGC TTTGTTGGTG GCAAGCCATT GGTGAATCAA TTTACCTCCA TGTCGCAGGT GCCTGCGCAA ACACCTGAAT CAGAGGCAAT GTCTAAGGCA TTAAAAAAGC TTGGCTTTAA CTTTGTTGGT CCGACGATTT GTTATGCTTT TATGCAGGCG GTGGGGATGG TGAACGATCA TCTAGTTGAT TGCATTGCCT ATGATGCTTG CTGTGGCGGC AAATAA
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Protein sequence | MEEIRCNWVS DDPLYREYHD KVWGRPVYDS KELFAKLCLD GQQAGLSWIT ILKKQQNYEQ AFADFEPAVI ATFDDAKVEE LMANPGIVRN RLKIHSIIRN AKGYLAYTAD GKDFAEFLWS FVGGKPLVNQ FTSMSQVPAQ TPESEAMSKA LKKLGFNFVG PTICYAFMQA VGMVNDHLVD CIAYDACCGG K
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