Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0015 |
Symbol | |
ID | 4477454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 17706 |
End bp | 18749 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639724531 |
Product | putative signal transduction protein |
Protein accession | YP_867666 |
Protein GI | 117918474 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1639] Predicted signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000000189797 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGATTAAGT CCATATTTAA TAAAATTTTT AATATCCGCG AAGAGACAAT ACTGGAGCGA CCTAAAAGCT TTAGTCAAAC CGATCTCAGT AAATCGTTGG ACAAAGTTTC AGCCCCTAAA CGCCAAGAAG AACCCGTTGA TACCGTGGTG AGTGTCGACT TAGAGGCGTT ATTTTATAGT CTGTTGTTTC CTGCCAGAAC CAAAGATGCT GGTGGCGTTG CCAATAACCT TGAGCGGCGA GTCATGGCAG AAATAGAGCT CGCCTTAGCA TCGCCACAAG TGATAGCAGA AAAGGTGCTT AAGCTTCCCT CTAAGGTGTT GGAATTAGAC CGTAAGTTAG CTGAGCCACA GTTTGATACT AAGGACTTGT TGGCGTTAAT CGAGAAAGAT CCCTTACTAA GCGTCGAAGT GCTTAAGCTG TGCAACTCAC CAGCCTTTAA GCGTGGAGAT AGAGAGGTCA CAAGCCTGCA GCAGGCTTTA GTGCAGCTCG GCCGTGAACA GTTACGCCGC TTTGTGACGA GTTGCCTAGT GCGTGAGATG CTCGATATTA AACCCATTTA TTTTCGGCGC TTTGGTGCCG AAATTTGGCG TCATTCGATG CAGGTTGCCT TTTTAACCAG CGAACTGAGT GAAGAAGATA GAGACACGGC ATTCCTATTA GGACTACTGC ATGATGTGGG TAAGCTCGCC ATCTTTAAAA TGTTGCTCGA TGCCTTTGTG CAGGCAGAAC CGGGGGAGCA GCCAAATTCT TGGTTATTCC GACAAGTGAT GACAGCAAAA TCACTCACCT TAAGTGCTTT GTTGGCAAAG CATTGGCAAT TGCCAAGTAC CTTTGAAACC GAGCTTGATA AATTAGCCCA TGTCCATACT CGGCCGAATG AGGGAATTGC CGCTGTGGTT TGGCGCGCCA ATATCATCAG TGAGATTTCG ATGTTGCAGC AAGCGGGAAA ATTGCCTGCA GATATGCTGA GCAACTTGTT AGCCTTGGTT GGACTCGAGC CTGCTCAATT CGAAGCGTTG CACGAAAAAC TTCAGCAGTT TTAA
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Protein sequence | MIKSIFNKIF NIREETILER PKSFSQTDLS KSLDKVSAPK RQEEPVDTVV SVDLEALFYS LLFPARTKDA GGVANNLERR VMAEIELALA SPQVIAEKVL KLPSKVLELD RKLAEPQFDT KDLLALIEKD PLLSVEVLKL CNSPAFKRGD REVTSLQQAL VQLGREQLRR FVTSCLVREM LDIKPIYFRR FGAEIWRHSM QVAFLTSELS EEDRDTAFLL GLLHDVGKLA IFKMLLDAFV QAEPGEQPNS WLFRQVMTAK SLTLSALLAK HWQLPSTFET ELDKLAHVHT RPNEGIAAVV WRANIISEIS MLQQAGKLPA DMLSNLLALV GLEPAQFEAL HEKLQQF
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