| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3863 |
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| Symbol | |
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| ID | 4923987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4594563 |
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| End bp | 4595552 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640165489 |
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| Product | ATPase central domain-containing protein |
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| Protein accession | YP_001095985 |
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| Protein GI | 127514788 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000266484 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGCTACTG CGGAACAACT AAAAGCGCTT TTAAAGAGTC ACGCTGCACG TGACGATCAG
CGTTTTTACT CTGTTGCCCT TCAGGTTGCT GCCAAAGAAG CTCGACAGGG GCATAATAAG
CTTGCGAGCG ATATTAAAAA TCTTGTTGAG AAATCTCAGC GTTCTACCAA TAAGCTGGGT
CTAGCATCGT CTAGAACTAT ACCTTTTGCG CAACAGAATC AAAGTGAGTT AAAAGGTCTA
TTAGAGCTCA CGCCACACAG TGTTCGTCTT AATGAGCTTG TTCTTTCTGA TGACATACAA
GAACGTATGG AGAAGGTGAT ATTAGAACAA CGTCAGAAGG ACAAACTCAG TCAGTTTGGT
TTGCAGCCGC GTAGAAAACT TCTTTTTACT GGTTCTCCTG GAACTGGTAA GACAATGTCT
GCATCTATGT TGGCAACAGA GTTAAAATTA CCTCTTTATA CAATCGTCCT AGATAATCTT
ATTACACGTT TTATGGGAGA GACTGCTGCA AAGTTGCGTT TGATCTTTGA TCATATAAGG
CAAACAAGAG CAGTTTATCT TTTTGACGAA TTTGATGCTA TAGGAACTCA ACGAGGTGCA
CCCAATGATG TTGGGGAAAT TCGTAGGGTG TTAAACTCAT TTTTGTTATT TGTAGAGCAA
GATGCATCAG AGAGTATTAT TGTTGCTGCT ACAAACCATC CAGAGCTACT AGATCAAGCA
CTTTATAGAA GATTTGATGA CATCATTAAG TTTGAAAAAC CAAAATTTGA TCAAATATGC
CTTCTTATTC AAAATCGTCT ATCACTTTTC GATACTGATG ATTTTGATTG GGGGATGGTT
GCTGAAGCTG CAAATGGTTT GAGCTCTGCT GAGATTACCC GATCTTGTGA AGACGCAGCT
AAAGAAGCTG TTTTGAATTT TAATGCAAAA ATAACAAGTG AAACACTGTT AAAGGCCTTT
TCTAGAAGGC AGTCAGGTAA TAACAAATAA
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| Protein sequence | MATAEQLKAL LKSHAARDDQ RFYSVALQVA AKEARQGHNK LASDIKNLVE KSQRSTNKLG
LASSRTIPFA QQNQSELKGL LELTPHSVRL NELVLSDDIQ ERMEKVILEQ RQKDKLSQFG
LQPRRKLLFT GSPGTGKTMS ASMLATELKL PLYTIVLDNL ITRFMGETAA KLRLIFDHIR
QTRAVYLFDE FDAIGTQRGA PNDVGEIRRV LNSFLLFVEQ DASESIIVAA TNHPELLDQA
LYRRFDDIIK FEKPKFDQIC LLIQNRLSLF DTDDFDWGMV AEAANGLSSA EITRSCEDAA
KEAVLNFNAK ITSETLLKAF SRRQSGNNK
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