| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3806 |
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| Symbol | |
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| ID | 4924160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4528912 |
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| End bp | 4530456 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640165432 |
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| Product | phosphoglyceromutase |
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| Protein accession | YP_001095931 |
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| Protein GI | 127514734 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0696] Phosphoglyceromutase |
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| TIGRFAM ID | [TIGR01307] 2,3-bisphosphoglycerate-independent phosphoglycerate mutase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.823885 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACAC GCAAACGCCC ATTGGCACTG CTGATCCTCG ATGGCTGGGG TTACCGTGAA
AATACCCACA TGAACGCGGT ATATCACGCC AACACACCAG TACTCGATCG CCTCAACAAA
GAATACCCCA ACAGCCTGAT CTCAGGCTCT GGCCTGGATG TCGGCCTGCC CGACGGTCAG
ATGGGTAACT CAGAAGTTGG CCACATCAAC ATAGGCTCTG GCCGCGTGGT CTACCAGGAG
CTGACCCGCA TCGGTAAGTC GATTGAAGAT GGCGAGTTTG ACTCTAACCC GGCCTTTGTC
GACGCCGTAG ATAAGGCGAT CGCCGCAGAC GGCGCCGTAC ACATCATGGG ACTACTGTCA
CCCGGTGGCG TACACAGCCA TGAAAGCCAC ATCCAGGCCA TGTGTAAGAT GGCGGTTGCG
CGCGGCGCCA AGCAGGTTTA CCTGCACGCC TTCCTTGACG GTCGTGACAC GCCGCCAAGA
AGCGCCAAGG GCAGCCTGCA GGCCTTCAAC GAGCTGTTCG CCGAGCTAGG CACAGGCCGC
ATCGCCTCCT TAATTGGTCG CTACTACGCC ATGGACAGAG ACAACCGTTG GGATCGCGTC
TCGCAAGCCT ATGAGCTGAT CACTCAGGGC AAGGCGCTGC ACCTGTATCA AGACGCCGTG
GAGGCGCTCG ACGCCGCCTA TGGCCGCGAT GAAAACGACG AGTTCGTTGC CAGCTCGGCC
ATCACAGACG CCGACGGCCA GGTTGCGACC CTCAATGACA ACGACGCGCT GATCTTCATG
AACTTCCGCG CCGACCGTGC CCGTCAGATC ACCCGCAGCT TCGTCGACCC AGGATTCGAC
GGCTTCGAGC GTGCGGTAAC CCCTAAGATT AACTTCGTCA TGCTGACCGA GTACGCCGCC
GACATTAAGG CGCCTGTCGC CTACCCATCG GTGGATCTGG TCAACACCTT AGGCGAAGTG
CTGCAAAACA ACGGCAAGAC GCAGCTGCGT ATCTCGGAAA CCGAGAAATA CGCTCACGTC
ACCTTCTTCT TCAACGGCGG TAAAGAGGAG CCATTCGAGG GCGAAGACAG GATCCTTATC
CAGTCGCCTA AGGTCGCCAC CTACGACCTA CAGCCAGAGA TGAGCTCGAC CGAGCTGACC
GACAAACTGG TGGAAGCGAT CGAGTCGACC CAATATGACG TGATCATCTG TAACTACCCT
AACGGTGACA TGGTGGGTCA TACCGGCAAC TTCGATGCCG CCGTCAAGGC CTGTGAGGCA
GTCGATGCCT GTATCGGTCG AGTGGTTGAG GCGCTGGCCA AGGTAGATGG TGAGTGTTTG
ATCACCGCCG ACCATGGTAA CGCCGAGCAG ATGACCGACG AGCAAACTGG CCAGGCGCAC
ACCGCCCACA CCAGCGAACT CGTGCCCCTC ATCTATGTGG GACGCAAGGG TGAGATCGCA
CCGAACGGAA GATTAAGTGA TTTAGCGCCA ACCATGTTAA CCTTGATGGG ACAAACCGTG
CCATCAGAGA TGACAGGGCA CTCAATCATT ACCCTAAGCG AGTAA
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| Protein sequence | MTTRKRPLAL LILDGWGYRE NTHMNAVYHA NTPVLDRLNK EYPNSLISGS GLDVGLPDGQ
MGNSEVGHIN IGSGRVVYQE LTRIGKSIED GEFDSNPAFV DAVDKAIAAD GAVHIMGLLS
PGGVHSHESH IQAMCKMAVA RGAKQVYLHA FLDGRDTPPR SAKGSLQAFN ELFAELGTGR
IASLIGRYYA MDRDNRWDRV SQAYELITQG KALHLYQDAV EALDAAYGRD ENDEFVASSA
ITDADGQVAT LNDNDALIFM NFRADRARQI TRSFVDPGFD GFERAVTPKI NFVMLTEYAA
DIKAPVAYPS VDLVNTLGEV LQNNGKTQLR ISETEKYAHV TFFFNGGKEE PFEGEDRILI
QSPKVATYDL QPEMSSTELT DKLVEAIEST QYDVIICNYP NGDMVGHTGN FDAAVKACEA
VDACIGRVVE ALAKVDGECL ITADHGNAEQ MTDEQTGQAH TAHTSELVPL IYVGRKGEIA
PNGRLSDLAP TMLTLMGQTV PSEMTGHSII TLSE
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