| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3739 |
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| Symbol | trkA |
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| ID | 4921033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4452415 |
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| End bp | 4453824 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640165365 |
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| Product | potassium transporter peripheral membrane component |
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| Protein accession | YP_001095864 |
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| Protein GI | 127514667 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0569] K+ transport systems, NAD-binding component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00764602 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAATTA TCATATTAGG TGCGGGTCAG GTCGGCGGCA CATTAGCGGA AAACCTGGTT
GGTGAAAACA ACGACATCAC CATAGTCGAC AATGACCGCG ACCGGCTGCG CTCGCTGCAA
GACAAATATG ACTTGCGGGT AGTGCTGGGC CATGGTGCCC ACCCTGGCGT CCTCAAGGAC
GCGGGGGCCG AAGATGCCGA TATGTTAATT GCCGTGACCA ATAGCGACGA ATGCAACATG
GCGGCCTGCC AGATCGCCTT CTCCCTCTAT GGTACCCCCA CCAAGATCGC CCGTATCCGC
TCGGAGCAGT ATCTGGCGCT ACGGGACAAG CTGTTTATCG ACAGCGAGAC CAAGCAGAGC
GAGAACCGAC CTCGTGGTGG CTTCATCATA GACGAGTTGA TCGCCCCCGA GCAGCTGGTT
ACTTCCTACA TACGTCGTCT GGTGGAATAT CCAGGTGCCC TGCAGGTGCT GGAGTTTGCC
GAGGGACGCC TAAGCCTAGT AGCCGTGCGC GCCTATTATG GTGGCCCGCT AGTGGGTAAC
GCCCTGGCAG CCCTGCGCGA GCACATGCCA AACATCGACA CCCGTGTGGC AGCCATCTTC
AGACAGGGCC GTCCCATCAT GCCAAGGGGT ACCACCATCA TTGAGGCGGA CGACGAGGTA
TTCTTCGTCG CCGACAGTCG CCATGTGCGC GCCGTGATGA GTGAGATGCA GAAGCTGGAC
AACTCCTACC GCAATATCAT GATCGCCGGC GGCGGTAACA TAGGCCTGGG ACTGGCCAAG
CAGCTACAGC GTAATCATGC GGTCAAGCTG ATCGAGCACA GACCGGATCG CGCAGAGGCG
CTGTCTGAGA AGCTGGAAAA TACCACGGTA TTCTGCGGTG ACGCTTCAGA TCAGGAGCTG
CTGCTCGAAG AGCATATCGA CCAGACCGAC GTATTTATCG CGGTCACCAA CGACGACGAG
GCCAACATCA TGGCCGCCCT GCTGGCCAAG CGTATGGGCG CCAAGAAGGT GATGGTGCTG
ATCCAGCGTG AAGCCTATGT TGATATCGTC CAAGAGGCAA ATATCGATAT CGCCATCTCA
CCGCAACAGG CGACCATCTC GGCACTACTG ACCCATATCC GTCAGGGGGA TATCTGTAAC
GTCTACTCGC TGAGACGCGG CGCCGCCGAG GCGATCGAAG CCATCGCACA TGGCGATCCC
AGCACCTCCA AGGTGGTGGG CAAACAGATC AGCGAGATCA AGCTGCCACC GGGCACTACC
ATAGGCGCCA TCGTCCGCGA CGACGAGGTG CTGATGGCCC ACGATAAGAC GGTCATCGAG
CAGGGCGACC ATGTGATCTT GTTCCTGGTG AACAAGAAAT TTATCGGTGA AGTTGAAAAG
CTGTTCCAGC CTAGTGCATT CTTCTTCTAA
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| Protein sequence | MKIIILGAGQ VGGTLAENLV GENNDITIVD NDRDRLRSLQ DKYDLRVVLG HGAHPGVLKD
AGAEDADMLI AVTNSDECNM AACQIAFSLY GTPTKIARIR SEQYLALRDK LFIDSETKQS
ENRPRGGFII DELIAPEQLV TSYIRRLVEY PGALQVLEFA EGRLSLVAVR AYYGGPLVGN
ALAALREHMP NIDTRVAAIF RQGRPIMPRG TTIIEADDEV FFVADSRHVR AVMSEMQKLD
NSYRNIMIAG GGNIGLGLAK QLQRNHAVKL IEHRPDRAEA LSEKLENTTV FCGDASDQEL
LLEEHIDQTD VFIAVTNDDE ANIMAALLAK RMGAKKVMVL IQREAYVDIV QEANIDIAIS
PQQATISALL THIRQGDICN VYSLRRGAAE AIEAIAHGDP STSKVVGKQI SEIKLPPGTT
IGAIVRDDEV LMAHDKTVIE QGDHVILFLV NKKFIGEVEK LFQPSAFFF
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