Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3722 |
Symbol | |
ID | 4921079 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 4428785 |
End bp | 4430569 |
Gene Length | 1785 bp |
Protein Length | 594 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640165344 |
Product | hypothetical protein |
Protein accession | YP_001095847 |
Protein GI | 127514650 |
COG category | [S] Function unknown |
COG ID | [COG4805] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.241744 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATAAAC CCTTAGCCCC TTGTCTACTC TTACTCAGCC TCACGGCCTG TCAAATGGCC CCTACGGCGG ATGTCGCCAC GACGCCTAAA ACCAGTGTCA GCCAGAGCCA TCAGCAATTA CAGCGCATCA TGGACGATGC CTGGCAACTT AGATTAGAGT CTAGCCCAGA AATGGCCTAC GCACAGGGAG ACGAGACGGC GGCGGGTAAA CTGGATGACC TCTCACCCGA GGCGCTGGCA AACCATAACC AGGCAGAGCA GGCCCTGTTG GCACGCCTCA ATGCCTTAGA TTTGGCATCG CTCAATAAGG CCGATCGCAT CGACGCTCAG ATACTCATCT ATCAGTTACA AAACAGTGTC GATCAATACC GTTTCCACGA CCATTATCTA CCGATCACCG CAGAGAGTGG CTTTCACGCC TATATCGCCT CCATCGCCAA GGGCAACTTC AACAGCGAGG CCGATTACCG CAATTACTTA AGCAAGCTTG AGGCCCTGCC CCGCTATTTT TCGCAGCAGA CCTATTGGCT GAAACAGGGT CTGGCCCAAG GCATCACCCC GGCGAGGGTG GTCTTAAACG GCTTCGAAGA GAGCATTAGT GCCTTCATAG TGCCGGTTGA GCAGAGTGGT TATTTCAAGC CCTTCACCCA CTTTCCCAAG CACTTTACCC AGGCCCAGAA AGCCGAGTTG ACGGAGCAGG GCAAGGCTTT GATTGAGCAG AACGTACTGC CCAGCTATCA GGCCTTCTAT GACTTCATGA CCCAGGAATA TATCCCAGGC GCACGGGAGA GTATTGCCGC CTACGATCTT CCCGACGGTA AAGCCTTCTA TGAGAATCGC GTACGCTACT ACACTACACT GCCAATGACC GCAGACGAGG TGCACCAACT CGGGCTAAAA GAGGTTAAGC GCATTCGCGC CGAGATGCAG GCGATCATAG ATAAGCTCGG CTATCAGGGC AGCTTCGCCG ATTTCCTCCA CTTCCTGCGC ACCGATCCTC AGTTCTACGC CAAGACCCCG GAGCAGCTGT TGAAAGAGGC CGCCTTTATC GCCAAGAAGG CCGATGCCAT GCTGCCGAAG TTCTTCGGCA AGCTGCCGCG CACGCCCTAC GGCATCCAGG AGGTGCCCGC CGAGATCGCC CCCAAATACA CCACGGGGCG TTATTCTGGC GCCAGTGGCG ATGACCAACC CGGCTATTAC TGGGTCAACA CTTATGCCTT GGACAAACGT CCCCTGTATG AATTAGAAGC CCTGACCCTA CACGAAGCCG TACCTGGCCA TCACCTGCAG ATCTCCCTCA ACAAGGAGCT GACCTCCCTG CCTAACTTCC GTCGTTACAG CTATATCTCG GCCTTTGGCG AGGGATGGGG ACTCTACTCT GAGTATCTCG GACTGGAAGG CGGTTTCTAC CAAGACCCCT ACAGCAACTT CGGCCGTCTG ACCTACGAGA TGTGGCGCGC CGCCCGCCTG GTGGTCGACA CAGGCATGCA CGCCAAGGGT TGGACACGTC AGCAGGCCAT CGACTATATG GCCGGCAATA CGGCGCTGTC GCTTCACAAT GTCACGACGG AGATAGACAG GTATATCTCC TGGCCGGGAC AGGCACTGTC CTACAAGATA GGCGAACTCA CCATCAAGCG TTTACGCGCC AAGGCCGAAC AGGCACTGGG TGAAAAGTTC GACATCCGCG CCTTCCATGA CGCCGTCTTG GCCAATGGAT CTGTGCCCAT GGCGCTGCTG GAACAGCAGA TAGATGACTT CATCGCCGCT CAGGCCGCTC GCTAG
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Protein sequence | MYKPLAPCLL LLSLTACQMA PTADVATTPK TSVSQSHQQL QRIMDDAWQL RLESSPEMAY AQGDETAAGK LDDLSPEALA NHNQAEQALL ARLNALDLAS LNKADRIDAQ ILIYQLQNSV DQYRFHDHYL PITAESGFHA YIASIAKGNF NSEADYRNYL SKLEALPRYF SQQTYWLKQG LAQGITPARV VLNGFEESIS AFIVPVEQSG YFKPFTHFPK HFTQAQKAEL TEQGKALIEQ NVLPSYQAFY DFMTQEYIPG ARESIAAYDL PDGKAFYENR VRYYTTLPMT ADEVHQLGLK EVKRIRAEMQ AIIDKLGYQG SFADFLHFLR TDPQFYAKTP EQLLKEAAFI AKKADAMLPK FFGKLPRTPY GIQEVPAEIA PKYTTGRYSG ASGDDQPGYY WVNTYALDKR PLYELEALTL HEAVPGHHLQ ISLNKELTSL PNFRRYSYIS AFGEGWGLYS EYLGLEGGFY QDPYSNFGRL TYEMWRAARL VVDTGMHAKG WTRQQAIDYM AGNTALSLHN VTTEIDRYIS WPGQALSYKI GELTIKRLRA KAEQALGEKF DIRAFHDAVL ANGSVPMALL EQQIDDFIAA QAAR
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