| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3720 |
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| Symbol | |
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| ID | 4921077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4426159 |
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| End bp | 4427499 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640165342 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_001095845 |
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| Protein GI | 127514648 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.959602 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAAA AATATAATTA CAGCGGTCCT CGTTATACCT CTTACCCGAC CGCACTAGAA
TTTGACGCCT CCTTCACCGA AGAAGACCTG CTCACCTCTA TTGCCAACAG TAAGAGCAAT
AAACTGTCGC TGTATCTACA CATTCCTTTC TGCGCCAAGC TCTGCTACTA CTGCGGCTGC
AACAAGGTGA TCACCCGTCA CCAGCACAAG GCCGACCAAT ATATCGAATA CCTGGCGGCA
GAGATCGTCA AACGCGCACC GCTGTTTAAG CATTATCAGG TCACCCAGAT CCACTGGGGT
GGCGGTACGC CAACCTTCCT CAGCCCTGAG CAGATCCTAA GGCTGTCGGC GCTGCTCAGA
GAGCACTTTA ATATTGCCGA AGAGGGTGAA TACTCTATCG AAGTCGATCC TCGCGAGATC
GAACTCTCTA TGCTAGACAC CCTCAAAGAA GCAGGCTTCA ACCGTATCTC GGTCGGCGTA
CAGGACTTCA ACAAAGAGGT GCAGATTGCC GTTAACCGTG AACAGGACGA GCAGTTTATC
TTCGACCTGA TAGCCAAGGC TAAGGCCATG GGCTTCGTGT CGACCAACAT CGACCTGATC
TACGGCCTGC CGCACCAGAC ACCGGAGAGC TTTGCAGAGA CTATGCAGCG CGTACTGGAT
CTGTCTCCCG ACAGACTCTC TGTGTTTAAC TACGCTCACC TGCCGGCGCG TTTCGCGGCC
CAGCGTAAGA TTAAGGACGA GCATCTGCCG ACACCACAGC AGAAACTGGA GATGCTACAC
CAGACTATCG AGACACTGAC GGGTGCCGGC TACCAGTACA TAGGCATGGA CCACTTCGCC
AAGCCGGATG ACGAGCTTGC CATCCTGCAG AACGAAGGTC GCCTGCACCG TAACTTCCAG
GGTTACACTA CCCAGGAAGA GTGTGATCTT CTGGGTCTTG GGGTCTCCTC CATCAGCCAG
ATCGGCGATT GCTACGCCCA GAACCAGAAA GATATCCGCC CTTACTATGA GTCGGTGGAT
GAGAAGGGTC ACGCCCTATG GAAAGGCTGC AAGCTTAATC GTGACGACGA GATCCGCCGC
GCCGTGATCA AGCAGCTGAT CTGCCACTTC GATCTGGATA TGGCCAAGAT GGATGAGCGA
TTAGGGATTA AGTTTGAAGA GTACTTCGCC GAAGATCTCA AACTGCTACA AACCTTTATC
GACGACAAGC TGGTCGAAGT CAAAGACAGA AAGATCACAG TTGGCGAAAC CGGCCGTCTG
CTGATCCGCA ACATCTGTAT CTGTTTCGAC GTCTACTTCC GCGATAAGGC TCGTCAGCAG
CAGTTCTCTC GGGTTATCTA A
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| Protein sequence | MIEKYNYSGP RYTSYPTALE FDASFTEEDL LTSIANSKSN KLSLYLHIPF CAKLCYYCGC
NKVITRHQHK ADQYIEYLAA EIVKRAPLFK HYQVTQIHWG GGTPTFLSPE QILRLSALLR
EHFNIAEEGE YSIEVDPREI ELSMLDTLKE AGFNRISVGV QDFNKEVQIA VNREQDEQFI
FDLIAKAKAM GFVSTNIDLI YGLPHQTPES FAETMQRVLD LSPDRLSVFN YAHLPARFAA
QRKIKDEHLP TPQQKLEMLH QTIETLTGAG YQYIGMDHFA KPDDELAILQ NEGRLHRNFQ
GYTTQEECDL LGLGVSSISQ IGDCYAQNQK DIRPYYESVD EKGHALWKGC KLNRDDEIRR
AVIKQLICHF DLDMAKMDER LGIKFEEYFA EDLKLLQTFI DDKLVEVKDR KITVGETGRL
LIRNICICFD VYFRDKARQQ QFSRVI
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