Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3694 |
Symbol | |
ID | 4921618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 4398356 |
End bp | 4399309 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640165316 |
Product | ADP-L-glycero-D-manno-heptose-6-epimerase |
Protein accession | YP_001095819 |
Protein GI | 127514622 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | [TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCATAG TAACGGGTGC TGCCGGCTTT ATCGGTAGCA ACTTAGTTAA AGCGCTCAAT AATTTAGGGC GTAGTGACAT TATCGCCGTA GACGACCTGA CCGACGGCAC CAAGATGTTT AACCTGGCCG ACTGTGAAAT TGCCGACTAT CTGGATAAAG CCGACTTCAT CGAGCAGATC GCCCAGGGTC AGTTCGATGG CAAGGTCGAA GTGATCTTCC ATCAGGGTGC CTGCTCGTCG ACCACAGAGT GGGACGGCAA GTTCATGATG GCCAACAACT ACGAGTATTC CAAGACACTG CTCCACTTCT GCGAGCGTAA CGGCAGCCAG TTTATCTACG CCTCATCGGC TTCTGTCTAT GGCGGCAGCG ATAAGTTTAT CGAGCAGCGG GAACTGGAGA AGCCTCTCAA CGTCTACGCC TACTCCAAGT TCCTGTTCGA CCAATATGTC AGACAGCACA ACTTCACCAC TCAGGTGGCG GGCCTACGTT ACTTCAACGT CTATGGCCCT AGGGAGCAAC ACAAGGGCGG CATGGCCAGC GTGGCCTTCC ACTTCAACAA CCAGATCAAG GCAAGCGGCA TCTGTCGCCT GTTCCAGGGC CACGACGGCT TCGAAGATGG CAAGCAGCTA AGAGACTTCG TGTACGTGGA AGATGTGGTC AAGGTCAACC TCTGGCTTTG GCAAAACCCA GGGATCTCAG GAGTATACAA CTGTGGTACG GGTCAGGCAC AGAGCTTCAA CGACGTGGCC AATGCGGTGA TCGCCTATCA TGGTAAGGGA GAAATTGAAT ATATTCCCTT CCCGGATAAG CTCAAGGGCG CCTATCAGAG CTATACCCAG GCCGACCTCA CGCAGCTTAG AGCAGCAGGA TATACCCAGG CCTTTAAGAC GGTCGAAGAG GGGGTTCCCG AATATCTGGA CTGGCTGGCC GCGCAGCACT TTATCGGTCA GTAG
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Protein sequence | MIIVTGAAGF IGSNLVKALN NLGRSDIIAV DDLTDGTKMF NLADCEIADY LDKADFIEQI AQGQFDGKVE VIFHQGACSS TTEWDGKFMM ANNYEYSKTL LHFCERNGSQ FIYASSASVY GGSDKFIEQR ELEKPLNVYA YSKFLFDQYV RQHNFTTQVA GLRYFNVYGP REQHKGGMAS VAFHFNNQIK ASGICRLFQG HDGFEDGKQL RDFVYVEDVV KVNLWLWQNP GISGVYNCGT GQAQSFNDVA NAVIAYHGKG EIEYIPFPDK LKGAYQSYTQ ADLTQLRAAG YTQAFKTVEE GVPEYLDWLA AQHFIGQ
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