| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3682 |
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| Symbol | |
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| ID | 4921766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4386166 |
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| End bp | 4387596 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640165304 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001095807 |
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| Protein GI | 127514610 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.666768 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAGAAT CTGTTCAATA TGAGTCAAAA TGTCCAAAAG AAGACAATAT GAGCCAGCCT
AATAAAGAGA TGAAGCCCCT ACCATCCGCC GTATCTGTGC TAATCGTCGA CGATGAGCCG
GGCATGCGCA GCTTCCTGAA GAAGGCGCTG TCGAAGAAGT TCGCCCTGGT GGAAACCGCA
GGTAGCGTCG AAGATGCCGA GCAGCTCAGG AGCCGCTGTC ACTTCGATCT GCTGATCGTC
GATATCCGCC TGCCGGGTCG TTCCGGCATC GAGTGGGACG AGGCGCTGAG CGATCAGGAG
CGGCGCTCAG ACATCATCTT CATGACGGGC TATGCCGATA TGGACGTGGC CATCAAGGCG
CTGCGCGCCG GCGCCTCTGA CTTTATTATG AAACCCTTCC ACCTGGAGCA GATGATGAAG
GCGGTTGACC GCTGCATCGA ACGTCGCCTG CTCAAGCGCG AAAACCTCAT GCTGCGCCGC
GAGGTCTCCA TCGGCCAATC CTCCACCATC ATAGGCAGCA GCGATGCCAT GATGGAGGTG
AAACATGTGA TCGAGCGGGT GGCACCCACC AATGCGGTAA TTCTGATCGA AGGCGAATCG
GGCACGGGTA AGGAGCTGGT GGCCAGACAG CTGCATCTGC TCAGCGGTCG TCAGGGGCCC
TTTGTACCGG TCAACTGTGG CGCCATCGCT CCCGAACTGC TGGAGAGTGA ACTCTTCGGT
CATGCGGCTG GTTCCTTCAC CGGCGCCAAG GGCAACCGTG AAGGTTTATT CAGCTTCGCC
TCGGGCGGCA CCATCTTCCT CGACGAGATA GGCGAGATGC CGCTCAAGAT GCAGACGGCT
CTGCTTAGGG TGCTGGAGCA GCGCACCATA CGCCCCGTGG GCAGCGAGAA GGAGATCAAT
ATCGATGTCC GGGTGCTGGC GGCCACCAAC CGCAAGCTGG CGGATGAGGT GGAGGCCGGT
AACTTCAGGC GTGATCTCTT CTATCGACTC AACGTATTAG ACATAGTGAT ACCCCCGCTG
CGGGAGCGCC CCGAAGATGT GGTGGAGCTG ACCCATCACT TCACCCGCCT GTTGGCCGCC
GAGCTGGGGG TTAAAGAGGT GGTGTGGAGC CACGAGGATA TGCTCAAGCT GCAACAGCAT
GAGTGGCCGG GCAACATCCG TGAGCTGCGC AACATGATAG AGCGCTGTAT TTTGCTGGGT
AAGCCACCGG CGGAATATTG GAAACAGCAG CCTAAATCAG AGGCAACCGG CGAGCTGGGT
TATCCGCTGG ATTGGTCGCT CAAGGAAGTT GAGAAACACC ATGTGACCTC AGTGGTCGAC
CTGCATCAGG GCAACAAGTC TGCCGCCGCG CGCGATCTAG GGGTTTCCCG TAAGACACTG
GATCGTAAAT ATAAAGAGTG GTTCGAACTC AATCATCTCG AGGAAGAATA A
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| Protein sequence | MLESVQYESK CPKEDNMSQP NKEMKPLPSA VSVLIVDDEP GMRSFLKKAL SKKFALVETA
GSVEDAEQLR SRCHFDLLIV DIRLPGRSGI EWDEALSDQE RRSDIIFMTG YADMDVAIKA
LRAGASDFIM KPFHLEQMMK AVDRCIERRL LKRENLMLRR EVSIGQSSTI IGSSDAMMEV
KHVIERVAPT NAVILIEGES GTGKELVARQ LHLLSGRQGP FVPVNCGAIA PELLESELFG
HAAGSFTGAK GNREGLFSFA SGGTIFLDEI GEMPLKMQTA LLRVLEQRTI RPVGSEKEIN
IDVRVLAATN RKLADEVEAG NFRRDLFYRL NVLDIVIPPL RERPEDVVEL THHFTRLLAA
ELGVKEVVWS HEDMLKLQQH EWPGNIRELR NMIERCILLG KPPAEYWKQQ PKSEATGELG
YPLDWSLKEV EKHHVTSVVD LHQGNKSAAA RDLGVSRKTL DRKYKEWFEL NHLEEE
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