Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3662 |
Symbol | |
ID | 4921884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 4363954 |
End bp | 4364625 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640165284 |
Product | hypothetical protein |
Protein accession | YP_001095787 |
Protein GI | 127514590 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.217409 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.779139 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTATAGCA GGTTAGTTAA AGCTATAGAA AAACAAAGGA GTAACTCGTA CTGCTTGAGC CTCTGGAGTA TGTTCATAAG AGAGCGAGAT GGCCACAGGT GCATTATATG TAACTCGAAG AAGAAACTTT CTGCTCACCA CATAATCCGC AAGAGCTTTT GGAAGCACTT AAAGTTTCAA ACCGGAAATG GAATTACTTT ATGTCACGTA TGCCATAAAG ATCCACATAC CGGTTTTAAC GGACGTCCGG ATCTCAGTCA ACCGATGGAT GCACAAGGTG GAGAGAAAAT AGATTTATTT ACAGGTTATC TGGGTGCTCT GGTTATTGAC TCCTACAGGC GTAACCAGCT TGAAGAGTAT TTGTATCATT TTAGCGATGG AGCTTTAGAC GCATTCAAGA AGATTCAGGG TATACCAGAA GCCGCAACAT TCGAAGGACG ACAAATAGAG AAGGCGTATC AAATATGGAA TCAAACCCCA AGAGGAATGT TTGAAGCAAT ATTAAATTCC GTAGGTGTAA CTATTCCAGA GGATTATGTT CAAAATGAAG AAGTGACAAT GTATTACTCT GACACTTTGA AAAAGAAAGA TGGTAGTCCT GCAGATGTAA TGTACTTTCG ATATATCCCT CCAACAGAAT TTAAAGAAAA TCCAGATGAT ACTCTGGAGT AA
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Protein sequence | MYSRLVKAIE KQRSNSYCLS LWSMFIRERD GHRCIICNSK KKLSAHHIIR KSFWKHLKFQ TGNGITLCHV CHKDPHTGFN GRPDLSQPMD AQGGEKIDLF TGYLGALVID SYRRNQLEEY LYHFSDGALD AFKKIQGIPE AATFEGRQIE KAYQIWNQTP RGMFEAILNS VGVTIPEDYV QNEEVTMYYS DTLKKKDGSP ADVMYFRYIP PTEFKENPDD TLE
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