Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3604 |
Symbol | |
ID | 4922509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 4302598 |
End bp | 4303563 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640165226 |
Product | hypothetical protein |
Protein accession | YP_001095729 |
Protein GI | 127514532 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG2177] Cell division protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.001088 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAGC AACCTCAATT GGTGCGCAGT AAGCTGCCTA TCAGCGGTCG TATCGTGATG TTTTTTATCC GTCACATTCA ACATGCCATG GGCAGCATGG GGGAGTTATG GCGCAATCCC GTCTCCTCGC TGATGACCAT GGCCGTGCTG GGGGTAAGCC TTAGCCTGCC AGCGGCCCTG CAGGTGTTGG TGAAGAACGC CGAGACCATT ACTCAGTCTT GGAACAGCGC CGCCGAGATC TCCCTGTTTA TAGACGAGGG ACGCAGCGAG CGCAGCATAC AGAGCCTCAT CAGCCGTATC AGCGCCTATC CTGAGGTGAG CGCCGTCAGT TATATCGACC GCGACAAGGC CCTGGAGGAG TTTCAGCGCC TGTCGGGTTT CGGTGAGGCC TTGGCCTATC TGGATGAGAA CCCGCTACCT GCGGTGATCA CGGTAACCCC GGGCATCAAG CATGCCAGCC CTAATGGCGC CCGCGAGCTG CTAAAGAAGC TGGAGCTAGA GCCTGAGGTG AGTTTTGGTC GCCTGGATAT CGAGTGGCTG GAGCGTCTGC AGGCCGTGGT GAGGCTGCTG GAGCGCACCG TGATGGCCAT CGCCGCCCTG CTGGTGTTGG CCGTGGTGCT GGTGATAGGT AACACCATAC GTCTGGCGAT CATGAATCGC CGCACCGAGA TTGAGGTGAT GAAGCTGGTG GGCGCCACAG AGGCCTTCAT TCAGCGTCCC TTCCTCTATA CCGGGATCTG GTTTGGGGTG ATCGGCGGCG TACTGGCCTG GGTGATCATC AATCTGCTGG TCTGGTATCT GGACGGTGCC CTGGCGAGCC TGCTTGGCCT CTATGGCAGT ACGCTGGAGA TGCAGTCGCT GACCCTGGTT GAGCTGGGCG AGCTGATACT CTTGGCCTCC TTCCTCGGCT GGTTAGGTTC CTACCTGTCG GTGCGTCAAC ACCTAAGGGC GATCGAGCCT TCCTAG
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Protein sequence | MSQQPQLVRS KLPISGRIVM FFIRHIQHAM GSMGELWRNP VSSLMTMAVL GVSLSLPAAL QVLVKNAETI TQSWNSAAEI SLFIDEGRSE RSIQSLISRI SAYPEVSAVS YIDRDKALEE FQRLSGFGEA LAYLDENPLP AVITVTPGIK HASPNGAREL LKKLELEPEV SFGRLDIEWL ERLQAVVRLL ERTVMAIAAL LVLAVVLVIG NTIRLAIMNR RTEIEVMKLV GATEAFIQRP FLYTGIWFGV IGGVLAWVII NLLVWYLDGA LASLLGLYGS TLEMQSLTLV ELGELILLAS FLGWLGSYLS VRQHLRAIEP S
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