Gene Shew_3604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3604 
Symbol 
ID4922509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp4302598 
End bp4303563 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content59% 
IMG OID640165226 
Producthypothetical protein 
Protein accessionYP_001095729 
Protein GI127514532 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG2177] Cell division protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.001088 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAGC AACCTCAATT GGTGCGCAGT AAGCTGCCTA TCAGCGGTCG TATCGTGATG 
TTTTTTATCC GTCACATTCA ACATGCCATG GGCAGCATGG GGGAGTTATG GCGCAATCCC
GTCTCCTCGC TGATGACCAT GGCCGTGCTG GGGGTAAGCC TTAGCCTGCC AGCGGCCCTG
CAGGTGTTGG TGAAGAACGC CGAGACCATT ACTCAGTCTT GGAACAGCGC CGCCGAGATC
TCCCTGTTTA TAGACGAGGG ACGCAGCGAG CGCAGCATAC AGAGCCTCAT CAGCCGTATC
AGCGCCTATC CTGAGGTGAG CGCCGTCAGT TATATCGACC GCGACAAGGC CCTGGAGGAG
TTTCAGCGCC TGTCGGGTTT CGGTGAGGCC TTGGCCTATC TGGATGAGAA CCCGCTACCT
GCGGTGATCA CGGTAACCCC GGGCATCAAG CATGCCAGCC CTAATGGCGC CCGCGAGCTG
CTAAAGAAGC TGGAGCTAGA GCCTGAGGTG AGTTTTGGTC GCCTGGATAT CGAGTGGCTG
GAGCGTCTGC AGGCCGTGGT GAGGCTGCTG GAGCGCACCG TGATGGCCAT CGCCGCCCTG
CTGGTGTTGG CCGTGGTGCT GGTGATAGGT AACACCATAC GTCTGGCGAT CATGAATCGC
CGCACCGAGA TTGAGGTGAT GAAGCTGGTG GGCGCCACAG AGGCCTTCAT TCAGCGTCCC
TTCCTCTATA CCGGGATCTG GTTTGGGGTG ATCGGCGGCG TACTGGCCTG GGTGATCATC
AATCTGCTGG TCTGGTATCT GGACGGTGCC CTGGCGAGCC TGCTTGGCCT CTATGGCAGT
ACGCTGGAGA TGCAGTCGCT GACCCTGGTT GAGCTGGGCG AGCTGATACT CTTGGCCTCC
TTCCTCGGCT GGTTAGGTTC CTACCTGTCG GTGCGTCAAC ACCTAAGGGC GATCGAGCCT
TCCTAG
 
Protein sequence
MSQQPQLVRS KLPISGRIVM FFIRHIQHAM GSMGELWRNP VSSLMTMAVL GVSLSLPAAL 
QVLVKNAETI TQSWNSAAEI SLFIDEGRSE RSIQSLISRI SAYPEVSAVS YIDRDKALEE
FQRLSGFGEA LAYLDENPLP AVITVTPGIK HASPNGAREL LKKLELEPEV SFGRLDIEWL
ERLQAVVRLL ERTVMAIAAL LVLAVVLVIG NTIRLAIMNR RTEIEVMKLV GATEAFIQRP
FLYTGIWFGV IGGVLAWVII NLLVWYLDGA LASLLGLYGS TLEMQSLTLV ELGELILLAS
FLGWLGSYLS VRQHLRAIEP S