Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3554 |
Symbol | glnA |
ID | 4922689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 4244487 |
End bp | 4245896 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640165176 |
Product | glutamine synthetase |
Protein accession | YP_001095679 |
Protein GI | 127514482 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0174] Glutamine synthetase |
TIGRFAM ID | [TIGR00653] glutamine synthetase, type I |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGTTG AATCAGTTTT ACAACAACTA GAAGAACTTG AAGTTAAGTT TGTTGATTTG CGTTTTACCG ATACTAAAGG TAAAGAGCAG CACGTATCTA TTCCTGCTCA CCAGGTTGAT GCCGATTTCT TTGAAGACGG TAAAATGTTC GACGGTTCAT CTATTGCTGG TTGGAAAGGC ATTAACGAGT CAGACATGGT CCTGATGCCA GACCCAACGA CCTTCGTTCT TGACCCATTC ACCGAAGAAA CCACTGCCCT GATCCGCTGT GACATTCTCG AGCCAGGCAC TATGACTGGT TACGACCGCG ACCCACGCTC TATCGCTAAG AAAGCCGAAG AGTACATGGT TTCTACCGGC ATCGCCGATA CCGTACTCAT TGGTCCTGAG CCAGAGTTCT TCCTGTTTGA TGACGTTAAG TTCGGTACCG ACATGTCTGG CTGTTTCGTT AAGCTAGACG CTAAAGAAGC GGCTTGGAAC TCAGGCACTC ACTACGAAGA CGGCAACACA GGTCACCGTC CATTCGTTAA AGGCGGTTAC TTCCCAGTAG CACCAGTTGA CTCTTCACAA GATCTTCGTA GCGCCATGTG TCTGGTTCTG GAAGAGATGG GTCAAGTGGT TGAAGCTCAC CACCACGAAG TGGCGACTGC CGGTCAAAAC GAGATCGCGA CTCGCTTCAA CAAGCTGACT GAAAAGGCTG ACGAAATCCA GATCCTTAAG TACGTGGTTC ACAACATGGC CCACGCTTAC GGCAAGACGG CGACCTTCAT GCCTAAGCCA ATCGTTGGCG ACAACGGTAG CGGTATGCAC GTTCACCAAT CACTGGCTAA AGATGGTGTC AACCTCTTCT CTGGTGACAA GTATGCGGGT CTGAGTGAGA CGGCGCTGTA CTACATCGGC GGTATCATCA AGCACGCTCG CGCGCTGAAC GCCTTCACTA ACCCAAGCAC CAACTCGTAC AAGCGTCTTG TGCCTCACTT CGAAGCACCA GTCATGCTGG CCTACTCGGC ACGTAACCGC TCTGCGTCTA TCCGTATCCC AGTAGTACCA AGCCCTAAGG CACGTCGTAT CGAGACTCGC TTCCCAGATC CAACGGCTAA CCCATACCTG GCGTTCGCTG CACTGCTGAT GGCTGGTCTT GACGGTATCC AGAACAAGAT CCACCCAGGC GAAGCCATGG ACAAAGATCT GTACGATCTG CCAGCGGAAG AAGCGGCTGA GATCCCACAG GTTGCGACCT CTCTTGAGAA CGCACTTGAG AACCTGGATG CAGACCGTGA GTTCCTTACC AAAGGCGGCG TATTCTCTGA TGACTTCATC GATTCTTACA TCGCACTGAA GACTGCAGAA GCAGAGAAAG TGGCTCGCAC CACTCACCCA GCAGAATTTG AGCTGTACTA CAGCCTATAA
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Protein sequence | MSVESVLQQL EELEVKFVDL RFTDTKGKEQ HVSIPAHQVD ADFFEDGKMF DGSSIAGWKG INESDMVLMP DPTTFVLDPF TEETTALIRC DILEPGTMTG YDRDPRSIAK KAEEYMVSTG IADTVLIGPE PEFFLFDDVK FGTDMSGCFV KLDAKEAAWN SGTHYEDGNT GHRPFVKGGY FPVAPVDSSQ DLRSAMCLVL EEMGQVVEAH HHEVATAGQN EIATRFNKLT EKADEIQILK YVVHNMAHAY GKTATFMPKP IVGDNGSGMH VHQSLAKDGV NLFSGDKYAG LSETALYYIG GIIKHARALN AFTNPSTNSY KRLVPHFEAP VMLAYSARNR SASIRIPVVP SPKARRIETR FPDPTANPYL AFAALLMAGL DGIQNKIHPG EAMDKDLYDL PAEEAAEIPQ VATSLENALE NLDADREFLT KGGVFSDDFI DSYIALKTAE AEKVARTTHP AEFELYYSL
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