Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3549 |
Symbol | |
ID | 4922852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 4235678 |
End bp | 4236892 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640165171 |
Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
Protein accession | YP_001095674 |
Protein GI | 127514477 |
COG category | [C] Energy production and conversion |
COG ID | [COG0348] Polyferredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTTTA TTGAATCCCT GACCCTGACA CTGGCCCTGA TCTACAGCTG CAGCCTGCTC TACTGGAGCG GCAAACGCTG GGGCGCCGTG GTGAGCGCTG CCTCCCTGCT GGGCGCGGCA CTGGTCACCC TCTACTGGCC ACTGTTTGTC GCCTTGCTGC TCGCCGCCGG CGTGCTGGCC CTCGCCCACA GATACCAGGG CGATTTCGTC AAAGGCGAGG TGCGCGCCAA CACCCTCAGG GAGGGAATAC AACACCTGCT GGCACTCTCC ATGTTGCTGG TCGGCATTCA ATATGCGGCC AACGCCGTCA TGCTCAAGCT GGGCATCACG CCCTACCTGA TGCGGCCCGA CGTGGGCGAC GCCTTCCTGC CCATCGCCGG CGCCATAGAG CTTAAGGCGA TCCTCACCCT AGGAATCTGG GATCAGAACC ATCCGGCCGC CGCGGTGATG CTCACCGTGG TGATCCTCAC GGGTTTGCTG TGTAAGCGCG CCTTCTGCGG CTGGGCCTGC CCCCTGGGAC TCGCCGGCGA ATACCTGTAT AAACTGAGAA AGCGCTTCAT CAAGCGTGAA CTGCTGCCAC CCGCCTGGCT CGACTGGCCG CTGCGCATGC TCAAATACCT GCTACTGGCC GGTCTGCTCT ATATCGTGCT CGGCATGCCT TCGGCCAGTA TTCCCCACTA TCTCGAGGGC AACTACCATA AGATAGCCGA CCTTAAGATG GCGCTCTTCT TCGTCACCCC GGGGCTCATC ACCCTGGCAT GCTTCGCCGT CATACTGCTG CTGGCCGCCT GGCGCCGCCA GGGCTTCTGC CGTTATATCT GCCCCTATGG CGCTCTGCTT GGCCTCACCA GCTTCTTGAG TCCGTTTAAG ATCCGCCGTA GCACCCAGCA CTGCCTCATC GAGACCAAGG GGATGAACTG CGACAAGTGT ACCCGCGCCT GCCCCGCCAA CATCAAGGTG CATCAACAAG GCACGGTACG CTCGGACGAA TGCCAGGCCT GCATGCGCTG CGTCTCCGCC TGCCCTAAGC AGGAGGCGCT GCACTTCAGC ACCCGCAACG GCATCAAGCT CTCCGCCCGT GGCCTCACCA TCATGCTGTT ACTGCTGCTG TTTATGATCC CGCTGATCGC CTATGTCGGG GGATTCTGGG TCAGCCAAAC GCCGACCGAA ATTAGGATGT ATTTGATACA ACATTTGGGG GCCATTGGGC ATTAG
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Protein sequence | MSFIESLTLT LALIYSCSLL YWSGKRWGAV VSAASLLGAA LVTLYWPLFV ALLLAAGVLA LAHRYQGDFV KGEVRANTLR EGIQHLLALS MLLVGIQYAA NAVMLKLGIT PYLMRPDVGD AFLPIAGAIE LKAILTLGIW DQNHPAAAVM LTVVILTGLL CKRAFCGWAC PLGLAGEYLY KLRKRFIKRE LLPPAWLDWP LRMLKYLLLA GLLYIVLGMP SASIPHYLEG NYHKIADLKM ALFFVTPGLI TLACFAVILL LAAWRRQGFC RYICPYGALL GLTSFLSPFK IRRSTQHCLI ETKGMNCDKC TRACPANIKV HQQGTVRSDE CQACMRCVSA CPKQEALHFS TRNGIKLSAR GLTIMLLLLL FMIPLIAYVG GFWVSQTPTE IRMYLIQHLG AIGH
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