| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3540 |
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| Symbol | |
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| ID | 4922843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4229319 |
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| End bp | 4229882 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640165162 |
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| Product | NapC/NirT cytochrome c domain-containing protein |
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| Protein accession | YP_001095665 |
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| Protein GI | 127514468 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACTGGC GTGCACTATT CAAACCTAGC GCGAAATACT CAATATTTGC CCTACTCGTG
GTGGGTATTG TAGTCGGTGT TGTGGGCTAC TTTGCGACAC AACAAACTTT ACATGCAACC
AGTACAGATG CCTTCTGTAT GTCTTGCCAC AGCAATCACT CTCTGAAAGA TGAAGTGATG
GCATCGGCTC ACGGCGGCGG ACGTGCAGGC ATAACTGTAC AGTGTCAAGA CTGTCACTTG
CCACACGGCC CAGTTGACTA CCTGATCAAG AAGATCATCG TATCTAAAGA TCTATACGGC
TTCCTTACTA TCGACGGCTT CAACACTCAA GAGTGGTTGG ATGAAAACCG TAAAGAGCAA
GCTGACCTGG CGCTGAAATA CTTCCGCGCG AACGACAGCG CTAACTGTCA GCACTGTCAC
ACTCGTATCT ACGAGAACCA GCCTGAAACC ATGAAGAAGA TGGCGAAGAG AATGCACGCC
AACAACTTCA AGAAAGAAGC TGACAAGCGT AAGACCTGTG TAGACTGTCA CAAAGGCGTT
GCACACGTTT ATCCTAAGGG ATAA
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| Protein sequence | MNWRALFKPS AKYSIFALLV VGIVVGVVGY FATQQTLHAT STDAFCMSCH SNHSLKDEVM
ASAHGGGRAG ITVQCQDCHL PHGPVDYLIK KIIVSKDLYG FLTIDGFNTQ EWLDENRKEQ
ADLALKYFRA NDSANCQHCH TRIYENQPET MKKMAKRMHA NNFKKEADKR KTCVDCHKGV
AHVYPKG
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