Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3529 |
Symbol | |
ID | 4922862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 4215413 |
End bp | 4216006 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640165151 |
Product | azoreductase |
Protein accession | YP_001095654 |
Protein GI | 127514457 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1182] Acyl carrier protein phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000068989 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAAG TACTGGTATT GAAATCAAGC ATCTTAGGGG ACTATTCACA ATCGGCTAAG CTGATCGACC ACCTGCAGCA ACACTGGCAG GGTCAGGGCG CCGAGGTAAC AGTCAGGGAT CTGGCGGCGC AGCCACTGCC TGTACTCGAT GGCGAGATCG CCATGGGGCT ACGTGGTGGT GACGAGCTGA GCCCGCGTCA ACAAGAGGTG TTGGCGCTGT CAGACGAGTT GGTGGCCGAG TTGAAGGCAC ACGACACCCT GGTGATCGCC GCCCCTATGT ATAACTTCAG CATTCCGACC CAGCTGAAAA ACTGGATCGA TCTGGTGGCC CGTGCCGGCG TAACCTTCAC CTACACAGAG ACAGGCCCTA AAGGCTTGGT AGAAGGTAAG CGTGCGGTCT TGGTAACCAC TCGCGGCGGC GTACACAAGA ATGGTGCGAG CGACCACGTG GTGCCTTACC TCAAGACAGT GCTTGGCTTT ATTGGTATCG ACGAGGTGGA AACTGTTTAC GGCGAAGCCC TCAACATGGG TCCAGAAGCG AATGAGCAGG GGATCAGCCA AGCCAAGCAG AGCATAGAGC AGCTGGTAGC TTAA
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Protein sequence | MAKVLVLKSS ILGDYSQSAK LIDHLQQHWQ GQGAEVTVRD LAAQPLPVLD GEIAMGLRGG DELSPRQQEV LALSDELVAE LKAHDTLVIA APMYNFSIPT QLKNWIDLVA RAGVTFTYTE TGPKGLVEGK RAVLVTTRGG VHKNGASDHV VPYLKTVLGF IGIDEVETVY GEALNMGPEA NEQGISQAKQ SIEQLVA
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