Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3515 |
Symbol | |
ID | 4922967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 4201059 |
End bp | 4201430 |
Gene Length | 372 bp |
Protein Length | 123 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640165137 |
Product | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ |
Protein accession | YP_001095640 |
Protein GI | 127514443 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAAGT CAAACCTGCC ACCCATCATG GCCAAACGTT GCCTGGAAGA TGGCGTCGAA TGGCAGCTGC GCATCGATGC CGACCTGCCC TATTTCGAGG GGCATTTTCC CGAGCAGGCG GTGCTTCCCG GCGTAACCCA ACTGGATTGG GCGGTACAGC TGGGCGCCAG CGAATTTGGC TATGCGCCCC AGGTGAAGAG CCTAGAGGTG CTCAAGTTTC AACAGTTGAT CCTGCCCGGC AGCGAGGTGC AACTGAAGAT CAGCCTCAAT CGCGCCAAAC ATAAGCTCAC CTTCGCCTAC TATCAGGGCG AGCAGCGCTT CGGCTCGGGC CGCGTCTGCC TGACGCCACA CGACAACGAG GAGAGAGGCT GA
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Protein sequence | MIKSNLPPIM AKRCLEDGVE WQLRIDADLP YFEGHFPEQA VLPGVTQLDW AVQLGASEFG YAPQVKSLEV LKFQQLILPG SEVQLKISLN RAKHKLTFAY YQGEQRFGSG RVCLTPHDNE ERG
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