| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3502 |
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| Symbol | |
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| ID | 4923054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4188286 |
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| End bp | 4189941 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640165124 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001095627 |
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| Protein GI | 127514430 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTCAC TATTCAAATC ACCGGTCGAC ATGTTGCATC ACTGGGTCGA GCAATATGGC
GATAGCACCT ACCTGAAACA ACCCATAAAC GGTCAATACG TTAACTACAG CTGGCGCGAA
GTGCAGCAGA AGATGCAGCA GATCGCCGGC GCCCTGCGTC ACCTCGGCCT GGAGCCGGGC
GACAAGGTGG CTGTGTTATC GAAGAACTGC GCCGAATGGT TCATTACCGA TCTGGCGCTG
ATGCACGGCG GCTATATCAG CGTGCCCATC TATCCTACCG CCAACGCCGA CACCATTCGC
TACGTGCTGG AGCACAGCGA ATCCAAGGCG ATCTTTATCG GTAAGCTGGA CTACTGGGCC
GATCAGGAGG CCGGGGTCGG TGGCGACATA CTGCGCCTTG CCATGCCCTA CGACACCATG
CCGGCACAAT ACCAGTGGGA CACACTGCTC AAGCTGGGCC ACCCCTTAGT CGAGGCCGAA
GCGCCGACGC CCGAGCAGAT CATGACCATC ATCTACACCT CGGGCTCGAC CGGTAAGCCT
AAGGGAGCGA TTCAGACCTT CGCCAGCTAT GAGTGGACCT GCCGCGCCGT GGTGCGCGAC
CTCAAGACAG ATGTCGAAGA CAGGCTGCTC TCCTACCTGC CGCTGGCCCA TATTACCGAG
CGTGTCGCCA TCGAGGGCTC CTCCTTCTAT TCCGGCAGCA GTGTCGCCTT CGTCGAGAGT
CTCGACAGCT TCGTTGCCGA CGTGCAGCGG GCAAGACCGA CCGTCTTCTT CTCTGTGCCT
CGCCTGTGGA GCCTGTTCCA GAAGAATATC ATCGACAAGA TCGGCTATAC CAAGCTCAAC
ATACTGCTGA AGATCCCCTT CGTCAGCTCG CTGGTGAAGA AGAAGATCCA TCAAGGGTTG
GGCCTCGAAC ATTGTCACCT GCTAGGTTCC GGCTCTGCGC CTATCCCGCC TTCGTTGATC
GCCTGGTATC ACAAGATTGG CCTTAACATC TGTGAAGCCT GGGGCATGAC GGAAAACAGC
GCCTACTCCA TCATCAACCA CCCCTTCGAT GCCAGCAAGA TAGGCACGGT CGGGCGTGCG
GTAGAAGGCT GTAGCGTCAA GCAGGGCGAC AACGGCGAGC TGCTGATCAA GAGCCCAGGC
CTGATGAGTG GCTACTACAA GCAGCCGGAG GTCACCCAGG CCAGCTTCGA CGAAGATGGC
TATTTCCGCA CCGGCGATCT CTGCTCAATC GACGCCGATG GCTGTGTCAC CATCACGGGC
CGGGTCAAGG ACAACTTCAA GACAGCCAAG GGCAAGTATG TCGCCCCAGT GCCTATCGAG
CGTAAGCTGG CCCAGGATCC TCACGTGGAG CTGATCTGCA TCATAGGCTC TGGCCTGCCA
CACCCTGTCG CCCTAGTACA GCTCTCCGAG GGCGCGGCCT TGCAACCCAA GGAAGAGGTG
CGCGCCTCAC TCAAGGCGAC CCTGGACAGC ATCAACCCTA ACCTGGAATC ACACGAAACC
GTCGATGCCA TCATAGTGGT GAGCGAGCCC TGGGATGTGG ATAACGACGT GCTAACGCCG
ACCCTGAAGA TCAAGCGCCA TGTGCTAGAG CAGAGATTCA GTGCCAAGGT CGAAGGCCAG
CGCGGCGGCG TGGTGCGCTG GGAAGATGAG CTCTAA
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| Protein sequence | MDSLFKSPVD MLHHWVEQYG DSTYLKQPIN GQYVNYSWRE VQQKMQQIAG ALRHLGLEPG
DKVAVLSKNC AEWFITDLAL MHGGYISVPI YPTANADTIR YVLEHSESKA IFIGKLDYWA
DQEAGVGGDI LRLAMPYDTM PAQYQWDTLL KLGHPLVEAE APTPEQIMTI IYTSGSTGKP
KGAIQTFASY EWTCRAVVRD LKTDVEDRLL SYLPLAHITE RVAIEGSSFY SGSSVAFVES
LDSFVADVQR ARPTVFFSVP RLWSLFQKNI IDKIGYTKLN ILLKIPFVSS LVKKKIHQGL
GLEHCHLLGS GSAPIPPSLI AWYHKIGLNI CEAWGMTENS AYSIINHPFD ASKIGTVGRA
VEGCSVKQGD NGELLIKSPG LMSGYYKQPE VTQASFDEDG YFRTGDLCSI DADGCVTITG
RVKDNFKTAK GKYVAPVPIE RKLAQDPHVE LICIIGSGLP HPVALVQLSE GAALQPKEEV
RASLKATLDS INPNLESHET VDAIIVVSEP WDVDNDVLTP TLKIKRHVLE QRFSAKVEGQ
RGGVVRWEDE L
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