| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3485 |
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| Symbol | |
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| ID | 4923163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4170055 |
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| End bp | 4172019 |
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| Gene Length | 1965 bp |
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| Protein Length | 654 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640165107 |
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| Product | peptidase S9 prolyl oligopeptidase |
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| Protein accession | YP_001095610 |
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| Protein GI | 127514413 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTAA TTCAGTCGTT TAGTTTAGCC TGCCTCTGCC TCATCAGTAG CCAAGTCACG
GCTTCAAACA AAGATATTAC CGAGCTTTTT AGCCGCTCAG CCGAATTTTC TAACGTGCAG
ATCTCCCCCG ACGGAGACTA CCTCAGCGCC ATCACCTCCC ACGAAGGTAA GCATATGCTG
ATGATTCTGG ACGCCAAAAC CAAGAAACCG ACCAATGTGG TTCGCTTTCC GGACAACGCC
CAGGTAGGGC AATACGTTTG GGTTAACAAT GAGCGTGTCG TGCTGGCTAA GGAATACCTA
AAAGGCTGGA GCGACCATCC CATCTATTAT GGTGAGCTGA TGGCTGTCAA TGCCGATGGT
TCTAAGCCAA CCTATCTGTT CGGTTATAAA GGCGGTGAGC AACAAACGGG TTCTCGCATC
AAGAAAAATA CAGCGATACA AGCCACAGCC TATATTCTCG ATCCTATGCC TGAAGATGAT
CGCTACATGC TCATCCAAGC GCTCCCTTGG GGCTCCGGCA GCGCAAACAC AGTGGAGAAT
CTTCAGCAAG TTTATAGAGT CGATGTCTAC AAGGGAACAC GTAGAAAAAT TGCGACCTCA
CCTATCTCCT ACGCTCGATT TCTACCGGAT CATGATGGCG AAGTTCGCTT TGTCAGTGGT
ACCCGCGACT ACGTTAGTTC CCAGCTCTAT TACCGCAAAG ATGATGAATG GGTCGACACA
GATAAGCTGA ATTTAAATCT CGATGATATT ACTCCTATCG CCTTCGGTGA TGATGAGAAC
AGTGTCTATG TACTCGGCAG CGAAAACGGT AAACCTAAAG GGGTCTATTT AGTCGATATC
AAGAGCGGTA AAAAGCAGCT TATTAGCCAG GACAAGGTAG TCGACCCGAG CAATGTGTGG
ATCAACCGCG TCAACAAACA ACTCTACGCC GTAGAATATG AGAATGGCTA CCCGACCTAT
GAGTTTGTCG ATAATGATGA AAAACTGGCC ACCACACTGA AACAGCTGCT CACCGCACTG
CCTGGCCATC AGGTTCATCT CGTCAGCCAG ACCAACGACA TGAGCAAACT GATCATCAAG
GCTTTCAACG ATAGAAATCC TGGCGACTAC TACATATTCG ATGCCACCAG CAAGAAGCTT
GAATATCTAG TCTCACAAAA GAAATGGTTA GATCCCGATA AGATGGCCGA GATGAAGCCA
ATCAGCTTTA CCGCCAGAGA CGGTAGAGTG ATCAGTGGAT ATCTCACATT GCCCTATGGC
AAAGAGGCTA AGAATCTGCC GCTCGTGGTC AATCCTCACG GCGGTCCACA TGGTCCAAGA
GACTGGTGGG GCTTTGACGA CCAGAACCAG TTGATCGCTA GTCAAGGCGC CGCCGTGCTG
CAAGTAAACT TCCGCGGGTC GGGCGGCTAT GGTAAAGAAT TTGAGCATGC TGGCCACCAG
AAATGGGGCA CGGAGATCCA GTACGATATT ATCGATGCCA CCAAATATGT CATCGAAAAA
GGCTTTGTGG ACAAAGAGCG AATCTGTATT GTCGGCGGCA GCTTTGGTGG ATACTCGGCG
CTACAAAGCC CAATCCTGGC ACCGGATCTA TTCAAGTGTG CCATAGGCTT CGCCGGTGTC
TATGATCTCG AGTTGATGTT CAACGAAGGG GATGTACAAG GGCGCCGCGC GGGTGAACGT
TACCTGAAGC AGGTACTAGG CGAGAACGAA GCCATGCTTG AGCAGATGTC GCCTAGCAAG
AACGTCGACA AACTCAAAGT AAACTTGCTA CTGGTGCATG GCGGTGAAGA TGAGCGAGCG
CCAATCGAAC AGCTCGAAGC GCTGGAAGAA GGGCTCAAGA AACACAACTA CCCTTATGAG
AAACTGGTCA TGGACGATGA GGGCCACGGC TTCTATAACG ATGAACATAG GGCGAAATAC
TACCGTCAGA TGATGAGCTT CCTCAAAGAC AACCTTAAGC TCTAA
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| Protein sequence | MKLIQSFSLA CLCLISSQVT ASNKDITELF SRSAEFSNVQ ISPDGDYLSA ITSHEGKHML
MILDAKTKKP TNVVRFPDNA QVGQYVWVNN ERVVLAKEYL KGWSDHPIYY GELMAVNADG
SKPTYLFGYK GGEQQTGSRI KKNTAIQATA YILDPMPEDD RYMLIQALPW GSGSANTVEN
LQQVYRVDVY KGTRRKIATS PISYARFLPD HDGEVRFVSG TRDYVSSQLY YRKDDEWVDT
DKLNLNLDDI TPIAFGDDEN SVYVLGSENG KPKGVYLVDI KSGKKQLISQ DKVVDPSNVW
INRVNKQLYA VEYENGYPTY EFVDNDEKLA TTLKQLLTAL PGHQVHLVSQ TNDMSKLIIK
AFNDRNPGDY YIFDATSKKL EYLVSQKKWL DPDKMAEMKP ISFTARDGRV ISGYLTLPYG
KEAKNLPLVV NPHGGPHGPR DWWGFDDQNQ LIASQGAAVL QVNFRGSGGY GKEFEHAGHQ
KWGTEIQYDI IDATKYVIEK GFVDKERICI VGGSFGGYSA LQSPILAPDL FKCAIGFAGV
YDLELMFNEG DVQGRRAGER YLKQVLGENE AMLEQMSPSK NVDKLKVNLL LVHGGEDERA
PIEQLEALEE GLKKHNYPYE KLVMDDEGHG FYNDEHRAKY YRQMMSFLKD NLKL
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