| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3480 |
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| Symbol | rpmB |
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| ID | 4923158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4166357 |
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| End bp | 4166593 |
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| Gene Length | 237 bp |
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| Protein Length | 78 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640165102 |
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| Product | 50S ribosomal protein L28 |
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| Protein accession | YP_001095605 |
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| Protein GI | 127514408 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0227] Ribosomal protein L28 |
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| TIGRFAM ID | [TIGR00009] ribosomal protein L28 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000307468 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAAGAG TATGCCAAGT TACTGGCAAG AAGCCGATGG TTGGTAACAA CCGTTCGCAC
GCTAAGAACG CGACTCGTCG TCGTTTTTTA CCTAACCTAC AGAACCACCG TTTCTGGTTA
GAAGACGAAA AGCGTTTCGT ACAGCTACGT GTATCTACTA AAGGTATGCG TATTATCGAT
AAGAAAGGTA TCGAAGTTGT TGTTGCTGAA CTTCGTGCCC GCGGCGAGAA GGTGTAA
|
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| Protein sequence | MSRVCQVTGK KPMVGNNRSH AKNATRRRFL PNLQNHRFWL EDEKRFVQLR VSTKGMRIID
KKGIEVVVAE LRARGEKV
|
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| |