| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3446 |
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| Symbol | |
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| ID | 4923460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4127902 |
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| End bp | 4128801 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640165068 |
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| Product | peptidase M23B |
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| Protein accession | YP_001095571 |
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| Protein GI | 127514374 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000175079 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000226335 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAGTGTAA CAGTTTTTAT TCAAGGTCGG AATGGTGCGA CGCGCTGGCA GCCGGGTAAG
CGTTGGCTAT TATTACCGGT TTTGCTTATT GCCGCAGGCA CTGGCTTATA TCAGCATAAC
GCCAAACAAA TTCAGCAACA GCAGGCCAGC GTCGATAACG AACGTGTCGC TCGCGAAGAG
CAGAAAAACG AGCTTATCGA ACTTAAAGGC GCGACCGAAT CGCAATTGGC GATCTTGGTT
ACCCACGTGG CTAAGATGCA GGCCAAGCTT GCACGTCTCG AGGCTCTGGG CCAGCAAGTT
GCAAAAGATT ACAAACTCGA AGATCAATTC GATTTCTCTT CTGAAGTAGG TGTTGGCGGC
CTGAGCGAAC TGGGCAGCAA CATCGAACTC GATCAGCTTA TCCAGGACAT GGATAGGCTA
GTGTCACGAA TAGATAACAA TAATGTTCAA TTATCACTAC TTGAAACGGT GACATCTAAT
CTCCATATAG ATGAAGAACG TTATATCTCA GGGCGTCCCA TCCAGAAAGG TTGGTTGTCT
TCGCCCTACG GTTTACGCAA TGATCCCTTT AACGGCCGCA GAACCATGCA TAAAGGCATA
GACTTTGCTG GTAAAGAGGG AGCCGATGTT GTCGCCACCG CGGGCGGCGT CGTAACATGG
GCAGGCAATA TGTTTGGTTA TGGTGAGTTG GTCGAGATAG ATCATGGCAA TGGTCTGCGA
ACTCGCTATG GACACAATAA GTCTTTGTCA GTAGCTGTAG GTGATGTGGT CGCAAAAGGC
GAAAGTATTG CCAAAATGGG GAGTACGGGT CGTTCGACCG GTCCCCATGT GCATTATGAA
GTGTTGCGTG GTGGACAGCA GATAGATCCT AAGAAGTATG TCTACCGCAA GGCAGGTTAA
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| Protein sequence | MSVTVFIQGR NGATRWQPGK RWLLLPVLLI AAGTGLYQHN AKQIQQQQAS VDNERVAREE
QKNELIELKG ATESQLAILV THVAKMQAKL ARLEALGQQV AKDYKLEDQF DFSSEVGVGG
LSELGSNIEL DQLIQDMDRL VSRIDNNNVQ LSLLETVTSN LHIDEERYIS GRPIQKGWLS
SPYGLRNDPF NGRRTMHKGI DFAGKEGADV VATAGGVVTW AGNMFGYGEL VEIDHGNGLR
TRYGHNKSLS VAVGDVVAKG ESIAKMGSTG RSTGPHVHYE VLRGGQQIDP KKYVYRKAG
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