| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3437 |
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| Symbol | |
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| ID | 4923451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4103663 |
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| End bp | 4105033 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640165049 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_001095562 |
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| Protein GI | 127514365 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000533693 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.14602 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTACAA GAGTGTATGC GTTAGGAGTG TTTGTTGGTT TATTTATTAT TTTCGTTGCA
GGAACACTTT TTTCTTATGA CTTGTATTTT TTATTAGGGC TTGAAAATGA ATATGATCTG
AAAAGATTTT TGGTTGTTGG CTTTATATGG TTGTGTTTGT TAGGCCTTTG TTTCACTAAG
CAAGATATAA CCTTTCATGT ATCTTTTTAT AAGGCAGTTG GTTTTACTGT TTTCGTTTTG
TTGTTATTGG TGTCTGCACT CTTTAGTCGG CATGTGTTCT GGGCATTTGT TGATGTAACC
AACATTTGTA TGTTAATAAC AGCGTTTTAT TTTTTTTCGG TGTCATTAAG AAGTTTAGAT
GAAAAAACGT TGTGTTCCGT ATTGTTTGCT GGTGTTTTGT TCTTTTCACT ACTGACTCTT
TTTAAGTACT CTCTGTTTTT GATTTTCTCC TATGTGGATG TCAATAGCTT CGATATTCAC
GGTTTGATTT CTGATTATAC TAATGCAAGG TTCTTTAATC AGTTGCAGGT TATGATTGTT
CCATTGTTAT ATATTCCATT CTGTTGTGAT GGTTTGAGGA AGTTTAAGAA GCTCTCTGTT
TTTATTGTGA CGCTGCACTG GTTAGTATTT CTTCAGACCG ATGCTCGTGG TGCAATTTTA
TCACTTTTTC TGGTTTTTAT TTTGTTCTTA TTTAACTTGG AAAGAGAAAG GCGAATAGGC
TTTCTTTATG AGGTGTTACG GCCATTGGCC TTTGGTATCT TGCTGTGGTT GTTACTAATT
AAGATAATTC CTTATTATCT TTTTGATAAT GTAACATTTC AACTCAGAAC GACTAGCTCA
GGTCGATTGG ATTTTTGGTT GTTTATATTG AAGGCTATTC CTGATTCTCC TTGGTTGGGG
TTTGGTCCGA TGAGTTTCAC CTGGGCAGAA GGAAAGCCCT TTCCCCATGC GCATCCCCAC
AATATTATTA TGCAAGTTTT ATATGAGAAT GGTGTATTGG TTTGTTTGAT TTTTGTTATG
GTGGCATTGC ATGTTGTATT TAACGTTTTG AAGTCGGTAG GAATAAACGA GTCTTTTTCA
AAATATCCAT TTTATTTTTC TTTGCTGTCT GGGTTGTGCT ATTCACAGTT GAGTGGAGTA
CTAGTCATGC CTTTTTCTCA ATTATTGTTT TCTCTTGTAT TAGCTTTATC TATATCTAGC
CCACAGCAAA ATGATTGTAT TGATGATTGT CGCATTAAAC GTTGGATTAT AATAATGCAG
TTCTTAGTCG TTACGTTTTT TTCGGCGGTA ATGTTTATTT CATACAATCA TGAAGGACTC
TCTGCTGGCT TCTTCCCTCG GATATGGTTG AGAGGAAATG TGATGAATTA A
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| Protein sequence | MTTRVYALGV FVGLFIIFVA GTLFSYDLYF LLGLENEYDL KRFLVVGFIW LCLLGLCFTK
QDITFHVSFY KAVGFTVFVL LLLVSALFSR HVFWAFVDVT NICMLITAFY FFSVSLRSLD
EKTLCSVLFA GVLFFSLLTL FKYSLFLIFS YVDVNSFDIH GLISDYTNAR FFNQLQVMIV
PLLYIPFCCD GLRKFKKLSV FIVTLHWLVF LQTDARGAIL SLFLVFILFL FNLERERRIG
FLYEVLRPLA FGILLWLLLI KIIPYYLFDN VTFQLRTTSS GRLDFWLFIL KAIPDSPWLG
FGPMSFTWAE GKPFPHAHPH NIIMQVLYEN GVLVCLIFVM VALHVVFNVL KSVGINESFS
KYPFYFSLLS GLCYSQLSGV LVMPFSQLLF SLVLALSISS PQQNDCIDDC RIKRWIIIMQ
FLVVTFFSAV MFISYNHEGL SAGFFPRIWL RGNVMN
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