| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3331 |
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| Symbol | |
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| ID | 4924041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3975872 |
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| End bp | 3976648 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640164943 |
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| Product | Crp/FNR family transcriptional regulator |
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| Protein accession | YP_001095456 |
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| Protein GI | 127514259 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATAACAG ATCCACAGAT TAAGGCCTGC ATTCACCAAC ACCACCTGTT TTCGGCACTG
GGCGAAGAGG AGCTGTGTCG CCTGCTGGGG CAAGCCGCCA AGATCACCCT GGCCGCCCAC
GAAAATTTGT TCTATCAGGG CGATCTGGCC AAACGTTTCT ACCTGGTAAT TCAGGGGCAT
CTGCAACTCT ATCGCACCAG CCTGCAGGGG CAGGATAAGG TGATAGAGGT GGTGCGCGAG
GGGCGCACCT TCGCCGAGGC GCTGATGTTT AGTAGGCAGG CCTCCTATCC TGTGTCGGCC
CAGGCCGTGT CCCACTGCAC CCTGGTCAGT TTCGACAGCG AAGGTTACCT CGCCATGCTC
AGGGGCAATC CCGATGCCTG CATCGCCATC ATGGCGGAGA TGAGTGTCAG GTTACGCAAG
GATATCAATG AGGTAGAACT GTTATCTGTG CAGAATGCCC AGTCGCGTCT GCTGCTTTTT
CTGCTGCGCA ACATGCAGAA GATCGGCGAC AACCAGGGGC GGGTCGAGTT GGATATTCCT
AAACGTGTGT TGGCATCGCG CCTGTCGATT CAGCCAGAAA CTTTTTCCCG CCTGATGAAG
AAGATGGTGA CCGAAGGGAT CATCGGCGAG TCTCGTGGCG CCATAGATAT CAAAGATCTC
GCTAAGCTCT ATACCAGCGC CAACATGCCC CTTGCCAATC AGGCAATCCA GACCAGCGAG
CCGCTCATTC GCTCGGGTAA GGCGCCCTGT CAGCAGATCG CTATTGAGAT GGTGTAG
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| Protein sequence | MITDPQIKAC IHQHHLFSAL GEEELCRLLG QAAKITLAAH ENLFYQGDLA KRFYLVIQGH
LQLYRTSLQG QDKVIEVVRE GRTFAEALMF SRQASYPVSA QAVSHCTLVS FDSEGYLAML
RGNPDACIAI MAEMSVRLRK DINEVELLSV QNAQSRLLLF LLRNMQKIGD NQGRVELDIP
KRVLASRLSI QPETFSRLMK KMVTEGIIGE SRGAIDIKDL AKLYTSANMP LANQAIQTSE
PLIRSGKAPC QQIAIEMV
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