| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3310 |
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| Symbol | |
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| ID | 4923948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3950727 |
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| End bp | 3951458 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640164922 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001095435 |
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| Protein GI | 127514238 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000131342 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.806996 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAGACC TGATCTTGAA GGCGGAGAAC CTCGCCAAGA GCTATAAGAG TCGTGCCGTT
GTCCAAGACG TGAGCCTCAC GGTCAAGACC GGGCAAATCG TCGGCCTGCT GGGGCCAAAC
GGCGCCGGCA AGACCACCAC CTTTTACATG GTCGTCGGCC TGGTACAGAG CGACAAGGGC
CGCATCTTTA TCGACGATGA CGACCTGACG CTAGACCCAA TGCACCTACG CGCCCGCAAA
GGCATAGGCT ACCTGCCTCA GGAAGCCAGC ATCTTCCGTA AGCTCTCGGT GCGGGACAAC
ATCATGGCCG TGCTCCAGAC CCGCAGCGAT CTTAATAACG ATGGCCGCGA AGAGGAGCTG
GAACACCTGC TGGAAGAGTT TCACATCACC CATATCCGTG ACAGCCACGG CATGGCGCTC
TCGGGCGGTG AACGTCGCCG GGTGGAGATC GCCAGGGCCC TAGCCGCCAA CCCTAAGTTT
ATTCTTCTCG ACGAGCCGTT CGCCGGGGTC GATCCCATCT CGGTAATCGA CATCAAGAAG
ATCATCGAAC AGCTCAAGAA TCGCGGCCTG GGGGTGTTGA TCACCGACCA TAACGTGCGC
GAGACATTAG ACGTCTGCGA GAAAGCCTAT ATCGTCAGCC ATGGTAATCT GATCGCCGAG
GGCACACCCG CCGAAATCTT AGACAACCAG CAAGTACGAG CAGTGTACTT AGGTGAACAA
TTCAAGCTAT AG
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| Protein sequence | MTDLILKAEN LAKSYKSRAV VQDVSLTVKT GQIVGLLGPN GAGKTTTFYM VVGLVQSDKG
RIFIDDDDLT LDPMHLRARK GIGYLPQEAS IFRKLSVRDN IMAVLQTRSD LNNDGREEEL
EHLLEEFHIT HIRDSHGMAL SGGERRRVEI ARALAANPKF ILLDEPFAGV DPISVIDIKK
IIEQLKNRGL GVLITDHNVR ETLDVCEKAY IVSHGNLIAE GTPAEILDNQ QVRAVYLGEQ
FKL
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