| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3302 |
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| Symbol | |
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| ID | 4920803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3944760 |
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| End bp | 3945233 |
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| Gene Length | 474 bp |
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| Protein Length | 157 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640164914 |
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| Product | hypothetical protein |
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| Protein accession | YP_001095427 |
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| Protein GI | 127514230 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.132932 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTGACTC GAAAAATTGA ACTATTAGTT GGCTTGTTTA TTCTGTCGGG CCTGATGGCC
TTTCTGGTGT TGGTGTTCAA CGTGGCCAAT GTCGAGGTGA AGCCTGGCCA GAGCCACTAC
ACACTGTATG CCAAGTTCAC CAACATAGGT GGCCTCAAGG TGCGCTCACC GGTCAAGGTG
GGTGGCGTGG TGGTCGGCAG GGTGACGAAC ATCAGCCTAG ATCCTGAGGA ACTGGTGGCC
GTGGTCGAGC TGGCCATGGA CAATCAATAC GATCAGTTCC CCGAGACCAG TAGCCTGTCG
ATCCTCACCT CGGGTTTGTT GGGTGAGCAG TTCTTGGGAC TGACGCCAGG ATTTGTGATG
GATGATATCG GCATGCTCAA AGATGGCGAT CGTATCGACG ATACCCACTC GGCCTTAGTG
CTCGAAGATC TCATCGGCCA GTTCTTATAC AGTATGAAGT CTAAAGAAAA TTAA
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| Protein sequence | MLTRKIELLV GLFILSGLMA FLVLVFNVAN VEVKPGQSHY TLYAKFTNIG GLKVRSPVKV
GGVVVGRVTN ISLDPEELVA VVELAMDNQY DQFPETSSLS ILTSGLLGEQ FLGLTPGFVM
DDIGMLKDGD RIDDTHSALV LEDLIGQFLY SMKSKEN
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