| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3288 |
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| Symbol | |
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| ID | 4921124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3930840 |
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| End bp | 3931580 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640164900 |
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| Product | 23S rRNA (guanosine-2'-O-)-methyltransferase |
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| Protein accession | YP_001095413 |
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| Protein GI | 127514216 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.679975 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00104761 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGAAAC AAGATTTCAC CTTCGGCATC CACGCCGTTG AGGCCTTGCT AAAAAACAGC
CCTGAGCGGG TGATCGAGAT GTGGGTGTTG CAGGGGCGCG ACGATCAGCG TCTGATGCCG
CTGATCGCTA TGGCCGCCGA ATATGGCGTC TCGGTACAGC AGGCCTCACG CAAGGCGCTG
GACGACAAGG CCGGTAGCAG TCAGCACCAA GGCGTGCTGG TACGCGCTAA GCCTGCCAAG
CAACTCAATG ATAACGATCT GCTGGCGCTA CTGGATAAGA CAGAGACGCC GTTTCTGTTG
ATCCTCGATG GCGTAACCGA CCCTCACAAC CTGGGCGCCT GTCTGCGTAA CGCCGACGCC
GCCGGGGTAC ATGGGGTTAT CGTGCCGCGC GACAATTCGG TTGGCCTCAC GCCAACCGTT
AGCAAGGTTG CCTGTGGCGC CGCCGAAGTG GTGCCCCTGT TTCAGGTGAC TAACCTGGCG
CGTACCATGA AGGCCCTGCA AGAGAAGGGC GTGTGGATCG TTGGCGCCGC CGGCGAAGCT
GAGCACGACC TCTACAAGGC CGACCTGAAA GGCCCTATCG CCATCGCCAT GGGCGCCGAA
GACAAGGGCC TGCGTCGCCT GACTCGCGAG AGCTGCGACT CGCTGGCCTC TATCCCGATG
GCGGGGAGCG TCTCTAGCCT CAACGTCTCT GTGGCCACAG GGATCTGTTT GTTCGAGGCG
GTTCGCCAAA GGTTGGGGTG A
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| Protein sequence | MKKQDFTFGI HAVEALLKNS PERVIEMWVL QGRDDQRLMP LIAMAAEYGV SVQQASRKAL
DDKAGSSQHQ GVLVRAKPAK QLNDNDLLAL LDKTETPFLL ILDGVTDPHN LGACLRNADA
AGVHGVIVPR DNSVGLTPTV SKVACGAAEV VPLFQVTNLA RTMKALQEKG VWIVGAAGEA
EHDLYKADLK GPIAIAMGAE DKGLRRLTRE SCDSLASIPM AGSVSSLNVS VATGICLFEA
VRQRLG
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