| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3192 |
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| Symbol | |
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| ID | 4921582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3801234 |
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| End bp | 3801683 |
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| Gene Length | 450 bp |
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| Protein Length | 149 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640164802 |
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| Product | hypothetical protein |
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| Protein accession | YP_001095317 |
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| Protein GI | 127514120 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.15742 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.345039 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCATTT GGTTTAGACC CGTTACCCTG GAAGATTGCG CCAAGATGGA CGCAGGAATG
CATGGCAAAG GCACCTTGAT GCAGACCCTG GGGATCACCA TCAGCGAGAT TGGCGACGAT
TACATGAAGG CGACCATGCC GGCCTCGCCA GCGGTGCACA ACCCCTTGGG GATAGTTCAT
GGCGGCGCCA ATGTGGCTCT GGCCGAGACT GTGGCCAGCT ATGCGGCCAA CTTCGTGGTG
GATTTTGAGA ACTACTATTG TGTCGGTCAG GAGATCAACG CCAACCATCT TAAGGCGTCG
CGCAACGGCA TCCTGACGGC GACCGCCAAG CCGGTTCACC TGGGCAAACG CAGTTCGGTG
TGGGAGGTGT TGATCCACAA CAGCGCCGGT GAGCTCTGCT GTATCTCACG TATGACGGCG
GCAGTGGTTA AGCGTCAGGC GATGGTCTGA
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| Protein sequence | MSIWFRPVTL EDCAKMDAGM HGKGTLMQTL GITISEIGDD YMKATMPASP AVHNPLGIVH
GGANVALAET VASYAANFVV DFENYYCVGQ EINANHLKAS RNGILTATAK PVHLGKRSSV
WEVLIHNSAG ELCCISRMTA AVVKRQAMV
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