Gene Shew_3182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3182 
Symbol 
ID4921677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3788532 
End bp3788888 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content48% 
IMG OID640164792 
Producthypothetical protein 
Protein accessionYP_001095307 
Protein GI127514110 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACG TAAAATTAAT CAATATGATA CTAGCCGTTG CCTTGAGCTT ATTTGCCAAC 
GCAACATTTG CCAAAGAATT GCCACTACTG GATCAGACCC ACCTGGAAGC CGGCATTAAG
TGTGCGAGCT GTCATGGCAA GGCCGAGCCT CGTCAGGCCG TGACCATGAT GAAGTGCGTC
AAGTGCCACA ACACCCAGAA ACTGACGAAG AAAACGGAGA ACTTCAAACC GACCAACCCC
CATAAGAATC GCCACTTCGA TACAGAAACG GATTGTACTA ACTGCCACAA GGTTCACCAG
AAATCTGAGA ACTATTGCAC CGGCTGCCAC AATCGATTCG ATTTCGTGGT GCCCTAG
 
Protein sequence
MKNVKLINMI LAVALSLFAN ATFAKELPLL DQTHLEAGIK CASCHGKAEP RQAVTMMKCV 
KCHNTQKLTK KTENFKPTNP HKNRHFDTET DCTNCHKVHQ KSENYCTGCH NRFDFVVP