| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3140 |
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| Symbol | |
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| ID | 4922007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3733918 |
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| End bp | 3734706 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640164750 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_001095265 |
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| Protein GI | 127514068 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.432553 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTCGA GCATGAACAT GAAGCACGTT TACTTTACCG CCTTTAAGAG CATATTGATC
AAGGAGGTGA CCCGCTTCAC CCGTATCTGG GTGCAGACCC TGGTGCCGCC GGCGATCTCT
ATGACCCTCT ATTTTCTGAT CTTCGGTAAC CTGGTGGGTA AGCGCATCGG CGAGATGGGC
GGTGTGAGCT ATATGGAATT TATCGCCCCC GGCCTCATCA TGATGTCGGT GATCACCGCC
TCCTACTCCA ACGTGGCATC ATCCTTCTTC AGCGCCAAGT TCCAGCGTAA CCTGGAGGAG
CTGATCGTCG CGCCCGTGCC TCACTATGTG ATGATCGCCG GTTACGTGGG CGGTGGCGTC
GCCCGTGGCC TGTGTGTCGG CACCATAGTG ACTCTGGTGG CCATGTTCTT CGTGGATATC
AGCCTGCATC ACGCAGGGCT GGTGGCCCTG ACGGTGCTGC TGACCTCTAT CCTGTTCGCC
CTGGGCGGGC TTATCAACGC CGTGTTTGCC AAGAGCTATG ATGACATCAG CATAGTGCCC
ACCTTCGTAC TGACGCCGCT GACCTATCTG GGCGGCGTCT TCTACTCGCT GACTCTGCTG
CCGAGCTTCT GGCAGGGGGT GTCGCAGCTC AACCCTGTGG TCTATATGAT CAACGTTTTC
CGCTATGGCT TCCTGGGGTA TGCCGACATC AGTATCGGCC TGTCGGTGGC TATCATGGTC
GGCTTCTGCG CCGGACTCTG GTTGGTGGCC TACTACCTGA TCAGCCGTGG CATAGGCTTG
AGAACCTAG
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| Protein sequence | MSSSMNMKHV YFTAFKSILI KEVTRFTRIW VQTLVPPAIS MTLYFLIFGN LVGKRIGEMG
GVSYMEFIAP GLIMMSVITA SYSNVASSFF SAKFQRNLEE LIVAPVPHYV MIAGYVGGGV
ARGLCVGTIV TLVAMFFVDI SLHHAGLVAL TVLLTSILFA LGGLINAVFA KSYDDISIVP
TFVLTPLTYL GGVFYSLTLL PSFWQGVSQL NPVVYMINVF RYGFLGYADI SIGLSVAIMV
GFCAGLWLVA YYLISRGIGL RT
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