| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3135 |
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| Symbol | |
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| ID | 4922002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3727506 |
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| End bp | 3729149 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640164745 |
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| Product | L-lactate permease |
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| Protein accession | YP_001095260 |
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| Protein GI | 127514063 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1620] L-lactate permease |
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| TIGRFAM ID | [TIGR00795] L-lactate transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.770152 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.436399 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTAC TTCAACTACT CGCCAGTTTG ACGCCTGTAA TCAGCGTTAT GCTATTTTTG
GTGCTACTCA AGATGCCCGC ATCTCGCGCC ATGCCCATCT CTATGGTAAT GACAGGTCTT
GCCGCCGTCT TTATCTGGCA GATGGATACC ACCATCTTAG GTGCCTCTGT GGTCGAAGGC
CTACTCTCGG CCCTGACTCC ACTGAGCATC ATCTTCGGCG CCGTGTTCCT GCTGAACACC
CTGAAGTATT CGGGTGCCAT GGACACCATC CGCGCCGGCT TTACCAACAT CAGTGGTGAT
GCCCGCGTGC AGGTGATCAT CATCTGTTGG TTATTTGGTT CATTTATCGA AGGCTCTGCC
GGTTTCGGTA CCCCAGCCGC CATCGGCGCG CCGCTGCTGG TACTGCTAGG TGTGCCGCCT
GTGGCTGCCG CAGTGGTTGC CCTGATCGCC GACTCTACCA GCGTCTCCTT CGGCGCCATC
GGTCTGCCAG TTCTGTTCGG TATGGAGCAG GGTCTGATGC AAGGCGGTGT AAGTATGGCT
GCCGACCAGA TCGCCCAGCA CGGCACCAGC TTCGCCGACT ATGCCCAGTT TATCGCCCTG
CACATGATCA CTATCGATCT GGTGACAGGT ACCCTGATCC CGCTGGTTCT CGTCTCTGTA
CTCACCGGCT TCTTCGGCCG CAACAAGTCG TTCAAAGAGG GTCTGGCGAT CTGGAAATTT
GCCCTGTTCG CCGGCTTAGC CTTTACCGTA CCAGCCTGGC TTATCAACTA CTTCGCCGGT
CCAGAGTTCC CATCGGTTAT CGGCTCTCTG GTTGGTATGG CGCTAGTGAT TCCTGTGGCA
CGCAAAGGCT TGCTACTGCC TAAGACTCCT TGGAACGATT TCGCCGAAAA CGACAACCAG
ACTCAGGCTA AGGTAGAGAC CAAGGCGCAG TTCTCTCAGG TTGCCGCCTG GACCCCTTAC
ATCATCATGG CTGGCCTGCT GGTACTGTCT CGCACCGTGG CGCCACTCAA GGCCTGGCTC
ACCAGCTTCA ACATCAGCTG GACTAATCTG CTGGGCACTG AGCTGAAAGC CGGTTTCGCG
ACCCTGTACG CGCCTGGCGC CTTCTTCGTG CTGGTTTGTA TCCTGGGCTT CGTGCTGTTT
AAGATGAAAT CGCCAGCGAT CAAGGAGTCG ATCACCGTCT CTTGCAAGTC TATGCTGCCG
ACCATCATCT CCCTGGGCGC CTCTGTGCCT ATGGTGAAGA TCTTCCTTAA CTCTGGCACC
AACGAGGCGG GCCTGCAGTC TATGCCGGTT GCCTTGGCCG ACATGCTGGC TGGCTCTATG
GGCGCCATCT GGGCCTGGAT GTCACCGATT GTGGGTATCT TCGGTGCCTT CCTATCGGGC
TCAGCCACCT TCTCTAACAT GATGTTCTCT GGCCTGCAGT ACAGCGTGGC CGACAACATC
GGCATGAACC ACGCGTTAGT CCTAGCCCTA CAAGGCATTG GTGCCAACGC AGGTAACATG
ATGTGTGTCA TGAACGTGGT CGCCGCCGCT ACCGTGGTGG GTATGGCTGG CCGTGAATCA
GAAATTATCC GTAAAACCAT GCCCGTCGCT CTGGGTTATG CCTTGATTGC AGGTACTATC
GCTACCCTTT GGGGCGGTCT ATAA
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| Protein sequence | MTLLQLLASL TPVISVMLFL VLLKMPASRA MPISMVMTGL AAVFIWQMDT TILGASVVEG
LLSALTPLSI IFGAVFLLNT LKYSGAMDTI RAGFTNISGD ARVQVIIICW LFGSFIEGSA
GFGTPAAIGA PLLVLLGVPP VAAAVVALIA DSTSVSFGAI GLPVLFGMEQ GLMQGGVSMA
ADQIAQHGTS FADYAQFIAL HMITIDLVTG TLIPLVLVSV LTGFFGRNKS FKEGLAIWKF
ALFAGLAFTV PAWLINYFAG PEFPSVIGSL VGMALVIPVA RKGLLLPKTP WNDFAENDNQ
TQAKVETKAQ FSQVAAWTPY IIMAGLLVLS RTVAPLKAWL TSFNISWTNL LGTELKAGFA
TLYAPGAFFV LVCILGFVLF KMKSPAIKES ITVSCKSMLP TIISLGASVP MVKIFLNSGT
NEAGLQSMPV ALADMLAGSM GAIWAWMSPI VGIFGAFLSG SATFSNMMFS GLQYSVADNI
GMNHALVLAL QGIGANAGNM MCVMNVVAAA TVVGMAGRES EIIRKTMPVA LGYALIAGTI
ATLWGGL
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