Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3096 |
Symbol | |
ID | 4922260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 3675728 |
End bp | 3676711 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640164706 |
Product | metalloprotease MEP1-like protein |
Protein accession | YP_001095221 |
Protein GI | 127514024 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAAAA GCGTAATTGG AGTATCTGGC TTGCTGCTGA TGTCGGCAGG CGCCCTGGCC TTCGCGGGTC AAGCTGTTGC TGGTCAAGAG CAGGCTAAGA CGAGTTCAAC CCCGGCCTTC GAGCATGCCA ACAGTAACGC CGCCTTCCTG CGCTGCGGCA CCCGTACCCC CTCGGATCTC GAGGTGAAGA TGTTGAATGA GCATCTCAAG GCCCTCAAGA AGCCGAGTGG TGTGGGTAAT GGCAACGGCG GCGGTGGCGG CGGTGGTGAT GGTGGCACGG GCGGTAACTA CACGGCCGTG GGTTATAATA TTCCCGTCTA TGTCCATCTG ATCCTGAGCA GTAGCGGCGA CGGCGATGTG TCTGGTCTGG TTACGGAGCA GATGAATGTA CTTAATGACG CCTTCGCCGG CGCAGGTGGC GGTAGCGGCT TCGATACCAA GTTCAGCTTC ACCTTGATGG GGACAACAAA AACAGAAAAC GATGCCTGGT ACACTGCGGG GCCGGGCACC AGCGCCGAGC GTGCGATGAA ACAATCCCTT CGCCAGGGCG GCGCCGATAC CCTCAACATC TATGTCTCTA ATCCTGGTGG TGGCCTGCTG GGCTGGGCGA CCTTTCCCAC GGACTATGCC AGCAATCCTA GCGACGATGG CGTGGTGATC CTCAATCAAT CGCTGCCGGG CGGCGCGGCT TCGCCCTATA ACGAAGGCGA TACCGCGACC CACGAGGTCG GCCACTGGCT GGGCCTGTAT CATACCTTCC AGGGTGGCTG TAATGGCGGT GACCAGGTTT CCGATACCCC GGCCGAGCGT TCGGCGGCCT ATGGTTGTCC CTCGGGACGT GACACCTGTC GGCGTGACAG TGGGGACGAC CCCATCTACA ACTTCATGGA CTACACAGAC GATAGCTGCA TGGTCGAGTT CACCCAGGGC CAGTCTGAGC GCGCCGATAC CTTAAGTGGC GCCTATCGCT GGCCGTCTAA CTAG
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Protein sequence | MRKSVIGVSG LLLMSAGALA FAGQAVAGQE QAKTSSTPAF EHANSNAAFL RCGTRTPSDL EVKMLNEHLK ALKKPSGVGN GNGGGGGGGD GGTGGNYTAV GYNIPVYVHL ILSSSGDGDV SGLVTEQMNV LNDAFAGAGG GSGFDTKFSF TLMGTTKTEN DAWYTAGPGT SAERAMKQSL RQGGADTLNI YVSNPGGGLL GWATFPTDYA SNPSDDGVVI LNQSLPGGAA SPYNEGDTAT HEVGHWLGLY HTFQGGCNGG DQVSDTPAER SAAYGCPSGR DTCRRDSGDD PIYNFMDYTD DSCMVEFTQG QSERADTLSG AYRWPSN
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