| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3096 |
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| Symbol | |
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| ID | 4922260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3675728 |
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| End bp | 3676711 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640164706 |
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| Product | metalloprotease MEP1-like protein |
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| Protein accession | YP_001095221 |
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| Protein GI | 127514024 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAAA GCGTAATTGG AGTATCTGGC TTGCTGCTGA TGTCGGCAGG CGCCCTGGCC
TTCGCGGGTC AAGCTGTTGC TGGTCAAGAG CAGGCTAAGA CGAGTTCAAC CCCGGCCTTC
GAGCATGCCA ACAGTAACGC CGCCTTCCTG CGCTGCGGCA CCCGTACCCC CTCGGATCTC
GAGGTGAAGA TGTTGAATGA GCATCTCAAG GCCCTCAAGA AGCCGAGTGG TGTGGGTAAT
GGCAACGGCG GCGGTGGCGG CGGTGGTGAT GGTGGCACGG GCGGTAACTA CACGGCCGTG
GGTTATAATA TTCCCGTCTA TGTCCATCTG ATCCTGAGCA GTAGCGGCGA CGGCGATGTG
TCTGGTCTGG TTACGGAGCA GATGAATGTA CTTAATGACG CCTTCGCCGG CGCAGGTGGC
GGTAGCGGCT TCGATACCAA GTTCAGCTTC ACCTTGATGG GGACAACAAA AACAGAAAAC
GATGCCTGGT ACACTGCGGG GCCGGGCACC AGCGCCGAGC GTGCGATGAA ACAATCCCTT
CGCCAGGGCG GCGCCGATAC CCTCAACATC TATGTCTCTA ATCCTGGTGG TGGCCTGCTG
GGCTGGGCGA CCTTTCCCAC GGACTATGCC AGCAATCCTA GCGACGATGG CGTGGTGATC
CTCAATCAAT CGCTGCCGGG CGGCGCGGCT TCGCCCTATA ACGAAGGCGA TACCGCGACC
CACGAGGTCG GCCACTGGCT GGGCCTGTAT CATACCTTCC AGGGTGGCTG TAATGGCGGT
GACCAGGTTT CCGATACCCC GGCCGAGCGT TCGGCGGCCT ATGGTTGTCC CTCGGGACGT
GACACCTGTC GGCGTGACAG TGGGGACGAC CCCATCTACA ACTTCATGGA CTACACAGAC
GATAGCTGCA TGGTCGAGTT CACCCAGGGC CAGTCTGAGC GCGCCGATAC CTTAAGTGGC
GCCTATCGCT GGCCGTCTAA CTAG
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| Protein sequence | MRKSVIGVSG LLLMSAGALA FAGQAVAGQE QAKTSSTPAF EHANSNAAFL RCGTRTPSDL
EVKMLNEHLK ALKKPSGVGN GNGGGGGGGD GGTGGNYTAV GYNIPVYVHL ILSSSGDGDV
SGLVTEQMNV LNDAFAGAGG GSGFDTKFSF TLMGTTKTEN DAWYTAGPGT SAERAMKQSL
RQGGADTLNI YVSNPGGGLL GWATFPTDYA SNPSDDGVVI LNQSLPGGAA SPYNEGDTAT
HEVGHWLGLY HTFQGGCNGG DQVSDTPAER SAAYGCPSGR DTCRRDSGDD PIYNFMDYTD
DSCMVEFTQG QSERADTLSG AYRWPSN
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