Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3091 |
Symbol | |
ID | 4922255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 3671697 |
End bp | 3672320 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640164701 |
Product | membrane-flanked domain-containing protein |
Protein accession | YP_001095216 |
Protein GI | 127514019 |
COG category | [S] Function unknown |
COG ID | [COG3402] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGATG TGACTCCTCA AATTTCGGCA TCAATGCAGG CCAGGCGCCG GCTGGAGCAG CCAGACTGGA TCGCCATAGA TGAAGTGCCA CTGACACCAC TGGAACAGGC CTATCTGCAT CAGGTGCAGA TAGAAAACCT GCTGATCTTC ACGCCGCTGC TGATCATAGC GCCCCTGGCC GCGATACTGC TCAACCTGCC GGGCAGCCTG ATCATCGCCC TGGTGACGGG CATACTTATC TTGGCTGGCA TCGTCAGCTA TTGCCGCTAT CGCTACGCCC TCTCTATCGC CTACGGCGTG TTCGATCACG AGTTCATCAT GCAGAAGGGA TTGATTTGGC ATAAGAAGAT CGCCCTACCC TATACCCGCC TGCAGCATGT CAGCTTGTCT CAGGGCCCGC TGGAGCGCTA TTTTCATCAG CACACCCTAA AGTGCTTCAG CGCAGGTAGC GGCAGCGCCG AGATTAGCCT TCCAGGCCTG GGGGACGACA CGGCCGAGCC ACTGCGTAAG CATCTGCTGG CCAAAGCTTC CCAAAAACAG GCCTCCCAGA AGCAAGCTGC CCAAGAACAA AACTCACTGA AACAGGCATC GCAGAATCAA GCCCCCGACG GGCGCGAGGA TTAA
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Protein sequence | MEDVTPQISA SMQARRRLEQ PDWIAIDEVP LTPLEQAYLH QVQIENLLIF TPLLIIAPLA AILLNLPGSL IIALVTGILI LAGIVSYCRY RYALSIAYGV FDHEFIMQKG LIWHKKIALP YTRLQHVSLS QGPLERYFHQ HTLKCFSAGS GSAEISLPGL GDDTAEPLRK HLLAKASQKQ ASQKQAAQEQ NSLKQASQNQ APDGRED
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