| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3022 |
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| Symbol | |
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| ID | 4923073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3588794 |
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| End bp | 3589474 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640164632 |
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| Product | hypothetical protein |
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| Protein accession | YP_001095147 |
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| Protein GI | 127513950 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3235] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGGCAT TCTTGCTACA AAGATGGAGT GAGATTGATT GGCAACTTGG CGGCGCCCAG
CTGCTGACCA TGGCCGTGCT GGCACTCTGG CTTTGGGCCA TCTGGCCGGT CGAGGATGTG
AAGGCGCTAC TCAAGGATAA GGCGCTGCAG ACCCGCTTGC TGCTGGCCAT CTTCTTCGTC
AATGCCCTCT GGCTTATCGA CGCCAGCATC ACCCCGGGGA TTCATGCCCA CTTTCTCGGC
CTGGTGACAT TGATGCTGAT GTTTGGTTGG CGCCTGGCTA CCCTGGCGCT GCTGTTGCCA
GTCGCCTTCT TCGCCACCTT CATGCTCAAG TTGCCGCTGG ATTTCGCCAT CTATGGCCTG
GTGGCTATCG CCTTGCCGCT GTTTCTCAGC TATGTGGTCT ACAGTCAGGT GTTTAAGTAT
CTGCCGCACC ATCTGTTCGT CTACATCTTC TGCGGCGCCT TCATGAACGC CTTCCTCTGC
ATAGTGTTTC ACATACTCAG CTGGTCGACC TGGCTCTACC TGACGACCGA CTATGACTGG
GCCTATTTGA CGGATAACTA CCTGCTGCTG ATCCCGCTGC TGGCCTTCCC CGAGGCGCTG
CTGAATGGCA TGGCGATGAC CCTGATGGTG GTCTATCGTC CCGAATGGCT CTATGACTAC
TCGGACAGAA CTTATTTCTA A
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| Protein sequence | MTAFLLQRWS EIDWQLGGAQ LLTMAVLALW LWAIWPVEDV KALLKDKALQ TRLLLAIFFV
NALWLIDASI TPGIHAHFLG LVTLMLMFGW RLATLALLLP VAFFATFMLK LPLDFAIYGL
VAIALPLFLS YVVYSQVFKY LPHHLFVYIF CGAFMNAFLC IVFHILSWST WLYLTTDYDW
AYLTDNYLLL IPLLAFPEAL LNGMAMTLMV VYRPEWLYDY SDRTYF
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