| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3005 |
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| Symbol | |
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| ID | 4923410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3568387 |
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| End bp | 3569775 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640164615 |
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| Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
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| Protein accession | YP_001095130 |
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| Protein GI | 127513933 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1139] Uncharacterized conserved protein containing a ferredoxin-like domain |
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| TIGRFAM ID | [TIGR00273] iron-sulfur cluster-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAGTC AAACCACCGC ACTCAACTCA GGCGTGCATG CGAAGAAGGC CGACATCTTC
TGTCAGGATG AGGCTCGCGT CGATTGGCAC TCTAAGGCCC TATGGGTGCT GCGTGAGAAG
CGCGATCGCG CCGCCGCCAG CCTGCCAGAA TGGGAGCAGC TGCGTCAGCT CGGCTCCGAA
ATGAAGCTCC ACACCCTGAC CCATCTGGGC GAATACCTGG AGACCTTCGA GAAGAACTGC
CAGGCCAACG GTATCGTCGT GCACTGGGCC AAAGATGGCG CCGAGCACAA CCAGATAGTC
CATAACATTC TGGCCAAGCA TCAGGTGAAA AAGCTGGTTA AATCCAAGTC TATGCTCACC
GAAGAGTGTC ACCTCAACCC TTACCTCGAG AGCAAGGGCA TAGAGGTGAT CGACACCGAC
CTGGGTGAGC GCATCATTCA GCTGGCCAAG CAGCCGCCAT CACATATCGT GGTACCGGCG
ATCCACCTAA AGAAAGAGGA AGTCGGCGAC CTCTTCCACG ACAAGTTAGG CACAGAGGCG
GGCGCCTCGG ATCCTCTCTA TCTCACCCGC GCCGCCCGCG CTCACCTTCG TGAGCAGTTC
CTGTCGGCCG ATGCGGCCAT GACAGGGGTT AACATGGCCA TCGCCGACAA GGGCGCCGTA
GTGGTCTGCA CCAACGAAGG TAACGCCGAC ATGGGCGCTA ACCTGCCTAA GCTGCAGCTG
CACTCCATGG GCATAGACAA GATAGTGCCG GATCTCGACA GCGCCGCCAT CTTGCTGCGC
ACCCTGGCCC GCAACGCGAC CGGTCAGCCG ATCACCACCT ACTCCAGCTT CTATCGCGGT
CCACAGGATG GCGGCGAGAT GCATGTGATC ATCGTCGACA ACGGCCGCAC CGACATGCTG
CAAGACAAGA TCCTGGCGGA ATCGCTCAAG TGTATCCGCT GTGGTGGCTG TCTGAACACT
TGTCCTGTGT ATCGTCGCTC AGGCGGTTAC AGCTACAACT ACACCATCCC AGGCCCTATC
GGCATCGCCG TGGGTGCTCA GGCCGATGAT ACTCATTCTA TCCCTTGGGC CTGTACCCTG
TGTGGCAGCT GTAGCTATGT CTGCCCGACC AAGGTGCCGC TGGATAAGAT CATCCACCAT
CACCGCCGCC TCAAGGCCAA GGCGGGCAAA CTGCCTTACG GTAAGCGCAA CTATATGCCG
TTGGTCGGTA ACTTCATGGC CAGCGAAACC ATGCTCAACT GCTCCATGAG TGTCGCCCGC
ACTGCGCTGC GCATCCTGCC GGGCTCACTG CTCAAGCCAT TCTCTGGCGC CTGGGGCAAA
TACAGAGAGC TGCCGGTAGC ACCTAAGTCC AGCTTCGAAG CTTGGTTTAA CAAAAACAGA
GGTCAATAA
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| Protein sequence | MSSQTTALNS GVHAKKADIF CQDEARVDWH SKALWVLREK RDRAAASLPE WEQLRQLGSE
MKLHTLTHLG EYLETFEKNC QANGIVVHWA KDGAEHNQIV HNILAKHQVK KLVKSKSMLT
EECHLNPYLE SKGIEVIDTD LGERIIQLAK QPPSHIVVPA IHLKKEEVGD LFHDKLGTEA
GASDPLYLTR AARAHLREQF LSADAAMTGV NMAIADKGAV VVCTNEGNAD MGANLPKLQL
HSMGIDKIVP DLDSAAILLR TLARNATGQP ITTYSSFYRG PQDGGEMHVI IVDNGRTDML
QDKILAESLK CIRCGGCLNT CPVYRRSGGY SYNYTIPGPI GIAVGAQADD THSIPWACTL
CGSCSYVCPT KVPLDKIIHH HRRLKAKAGK LPYGKRNYMP LVGNFMASET MLNCSMSVAR
TALRILPGSL LKPFSGAWGK YRELPVAPKS SFEAWFNKNR GQ
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