| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2936 |
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| Symbol | |
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| ID | 4922138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3475658 |
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| End bp | 3476764 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640164541 |
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| Product | rod shape-determining protein RodA |
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| Protein accession | YP_001095061 |
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| Protein GI | 127513864 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0772] Bacterial cell division membrane protein |
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| TIGRFAM ID | [TIGR02210] rod shape-determining protein RodA |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00888464 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0244175 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACGCCC ATAGCCATAG ACCCAACATC TGGCAGCGCA TGCATATCGA CCTGCCATTG
CTTCTTGGGC TACTGGCACT CATGTGCTAT GGCCTGTTCG TTATCTATTC CGCCGGTGGC
GAAGATATGG CGCTGATGGA GCGTCAGCTG ATCCGCATGG GACTGTCGCT GGGAATCATG
TTGTTCGTGG CGCAGATTAA TCCCGAGGTG CTCAGGCGCT GGGCCTTCCC CATCTATATC
GCCGGGGTGA TTCTGCTGCT CGGTGTGCAT TTCTTCGGTG AGATCAACAA GGGCGCCCAG
CGCTGGCTCA ACCTGGGCTT CATGGAGTTT CAGCCCTCAG AGCTGATTAA GCTGGCCTTC
CCCATCACCA TGGCCTGGTA TATCAGTAAG TTTCCCCTGC CGCCGAAGAA GCGTTATCTG
GCCGGTGCCG GGGTAATTCT GCTCATTCCG ACACTCTTGA TTGCCAAGCA GCCGGATCTC
GGTACCTCTA TCCTGGTGGC GGCCTCAGGG ATCTTCGTGC TGTTTCTCTC CGGCATGAGC
TGGGCCATCG TCGGCAGCTT CATCGGCGGC GTGCTGGCCA TGCTGCCTGT GCTCTGGTTT
TTCCTGATGC ACGACTATCA ACGTACCCGG GTATTGACCC TGCTGGATCC AGAAAAAGAC
CCGCTGGGCG CCGGCTATCA TATTATTCAG TCCAAGATCG CCATCGGCTC AGGTGGGATC
TGGGGCAAAG GCTGGCTCGA CGGCACTCAA TCTCAGCTGG AGTTCCTGCC TGAGCGCCAT
ACAGATTTCA TCTTCGCGGT TATCGGCGAG GAGTTTGGCC TGATCGGCAG CCTTATTCTG
CTCTGCCTCT ACCTCTATGT GATCGGCCGC GGCCTGGTGA TCGCCTCGCG CGCACAAACC
AGTTTTGCCC GTTTACTCGC TGGCAGTATT ACTTTAACCT TCTTTGTATA TGTCTTTGTG
AATATTGGCA TGGTATCGGG ACTACTCCCC GTGGTCGGTG TGCCCCTGCC CCTCATCAGT
TACGGCGGTA CCTCTATGCT GACCCTGATG ACAGGCTTCG GGATCCTGAT GAGCATACAT
ACCCATAGAC GATTCATTGA CCGTTAA
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| Protein sequence | MNAHSHRPNI WQRMHIDLPL LLGLLALMCY GLFVIYSAGG EDMALMERQL IRMGLSLGIM
LFVAQINPEV LRRWAFPIYI AGVILLLGVH FFGEINKGAQ RWLNLGFMEF QPSELIKLAF
PITMAWYISK FPLPPKKRYL AGAGVILLIP TLLIAKQPDL GTSILVAASG IFVLFLSGMS
WAIVGSFIGG VLAMLPVLWF FLMHDYQRTR VLTLLDPEKD PLGAGYHIIQ SKIAIGSGGI
WGKGWLDGTQ SQLEFLPERH TDFIFAVIGE EFGLIGSLIL LCLYLYVIGR GLVIASRAQT
SFARLLAGSI TLTFFVYVFV NIGMVSGLLP VVGVPLPLIS YGGTSMLTLM TGFGILMSIH
THRRFIDR
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