| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2929 |
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| Symbol | leuS |
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| ID | 4922131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3467927 |
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| End bp | 3470518 |
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| Gene Length | 2592 bp |
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| Protein Length | 863 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640164534 |
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| Product | leucyl-tRNA synthetase |
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| Protein accession | YP_001095054 |
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| Protein GI | 127513857 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0495] Leucyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00396] leucyl-tRNA synthetase, eubacterial and mitochondrial family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.010661 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGAGC AATATCTACC TTCAGAGATT GAAGCTAAGG TGCAGCAGCA CTGGCAAGAC
ACTAAAACAT TTGAAGTAAC CGAGGACGAA AGCAAAGAGA AGTTTTACTG TCTCTCTATG
TTTCCATACC CTTCTGGCCG ACTGCATATG GGCCATGTCC GCAACTACAC CATAGGCGAT
GTCGTTGCCC GTTACCAGCG TCTGCAAGGA AAAAACGTAT TACAACCCAT AGGTTGGGAC
TCTTTCGGTC TGCCTGCTGA GAACGCCGCC ATCAACAACA AGACGGCACC GGCCCCTTGG
ACCTATGAAA ACATCGATTA CATGAAAAAC CAGCTGAAGA TGCTGGGTTT CGGCTACGAC
TGGAGCCGTG AGATCGCCAC CTGTACACCT GAATACTACC GCTGGGAGCA GTGGTTCTTC
ACCAAGCTGT ACGAGAAAGG CCTGGTCTAC AAGAAGACCG CCTCGGTTAA CTGGTGTCCA
AACGATGAAA CCGTACTGGC CAACGAGCAG GTTCAAGACG GCTGCTGCTG GCGCTGTGAC
ACCCAAGTGG TGCAAAAAGA GATCCCTCAG TGGTTCATCA AGATCACCGA CTACGCCGAA
GAGCTGCTGA ACGACATCGA CCAGCTGGAC GAATGGCCAG AGCAGGTCAA GACGATGCAG
CGCAACTGGA TCGGCCGTAG CGAAGGCATC GAGATGACCT TCCAGGTCGA GGGTAGCGAT
CAAAGCTTCG ACATCTATAC CACTCGCCCA GACACAGTAA TGGGCGTGAC CTATGTGGCG
ATCGCCGCCG GGCACCCGCT GGCGCAACAA GCGGCCGAGA ACAACCCTGT GCTGGCCGAG
TTTATCGAAG AGTGCAAGAA CGCCGACACC ACAGAAGCCG CCATGGCCGC CATGGAGAAG
AAGGGTGTCG ACACAGGCCT TAAGGCCATC CACCCGCTGA CAGGCAAGCT GGTACCTATC
TGGGCCGCTA ACTTTGTGCT GATGAACTAT GGTACTGGCG CCGTGATGTC GGTACCGGGT
CACGACCAAC GCGACTACGA ATTTGCCACT AAGTATGGCC TGCCGATCGT AGGCGTGATC
AAGCCTGCAG ATGGCGAGCT GGATATCAGC GAAGAAGCCT ACACTGAGAA GGGTATCCTG
TTTAACTCTG GCGACTCATT CCCAGAGCTG GACGGCCTAG ACTTCCAGGC GGCGTTCGAT
GCCATCGACG CTAAGCTGTC CAGCGAAGGC AAGGGTAAGC GCCAGGTGAA CTATCGTCTG
CGTGACTGGG GTGTCTCTCG TCAACGTTAC TGGGGCGCGC CAATTCCTAT GGTCACCCTG
GCCGACGGTA CCGTGATGCC AACGCCTGAA GATCAACTGC CGGTGATCCT GCCTGAAGAT
GTGGTCATGG ATGGTATCCA GAGCCCAATC AAGGCCGACA AAGAGTGGGC CAAGACCCAG
GTTAACGGTC AGGAAGCCTT CAGAGAAACC GATACCTTCG ACACCTTTAT GGAGTCTTCT
TGGTACTATG CCCGCTACTG TAGCCCTAAG GCCGACCAGA TGCTGGATCC AGCCAAGGCC
AACTACTGGC TGCCGGTGGA TCAATATATC GGTGGTATCG AGCACGCCTG TATGCACCTG
CTCTACTTCC GTTTCTTCCA CAAGCTGCTG CGCGACATCG GCCTGGTTAA CAGCGATGAG
CCAGCCAAGC GTCTGCTGAC CCAGGGCATG GTGCTGGCCG ATGCCTTCTA CTACACAGAC
GACAAGGGTG CCCGTGTCTG GGTATCGCCA AACGATGCCA AGGTTACCGA AACCGACGAC
AAGGGCCGTA TCGTCAAGGC CGTCGACAGC CAAGGTCATG AACTGGTTTA CACCGGCATG
AGCAAGATGT CTAAGTCGAA GAACAATGGT ATCGACCCAC AAGAGATGGT AGACAAGTAC
GGCGCCGATA CCGTACGTCT ATTCATGATG TTCGCCTCGC CACCAGAGCT GACCCTGGAA
TGGCAAGAGT CGAGCGTCGA AGGAGCTCAC CGCTTCATCA AGCGTCTGTG GAAACTGGCC
CACGACCATG TGTCACAAGG CCCAACCGTT GCCCTGAATG TTGCCTCACT CGATAGCGCT
CAAAAAGAGC TGCGCCGTGA GCTGCACAAG ACCATCGCCA AGGTAGGTGA CGATATCGAA
CGTCGTCAGA TGTTCAACAC CGCCATCGCC TCTGTGATGG AGCTGATGAA CCGTCTGCAA
AAGGCGCCGA TGGAGAGCGA GCAAGACAGA GCCCTGATGC AGGAAGCCCT GTGCGCCGTG
GTGCGTCTGC TCTACCCTAT CATCCCGCAC ACCAGCTTCG AGCTGTGGCA GGCACTGGGT
CACGAAGAGA CAATTGAAAA CGTGCTTTGG CCGGTCGTCG ATGAGTCGGC GCTGGTCGAA
GACAGCAAGC TGATCATAGT ACAGGTGAAC GGTAAGCTAC GCGCCAAGGT AACTGTGGCC
GCCGACGCCG ACAAAGACAC TGTGGAAGCC GCCGGTATGG CAGAGGAAGG CGTTATCAAG
CACACCGAAG GCAAGACGGT ACGTAAGGTG ATTTATGTAC CTGGTAAGCT ACTCAATATC
GTAGCCAACT AA
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| Protein sequence | MQEQYLPSEI EAKVQQHWQD TKTFEVTEDE SKEKFYCLSM FPYPSGRLHM GHVRNYTIGD
VVARYQRLQG KNVLQPIGWD SFGLPAENAA INNKTAPAPW TYENIDYMKN QLKMLGFGYD
WSREIATCTP EYYRWEQWFF TKLYEKGLVY KKTASVNWCP NDETVLANEQ VQDGCCWRCD
TQVVQKEIPQ WFIKITDYAE ELLNDIDQLD EWPEQVKTMQ RNWIGRSEGI EMTFQVEGSD
QSFDIYTTRP DTVMGVTYVA IAAGHPLAQQ AAENNPVLAE FIEECKNADT TEAAMAAMEK
KGVDTGLKAI HPLTGKLVPI WAANFVLMNY GTGAVMSVPG HDQRDYEFAT KYGLPIVGVI
KPADGELDIS EEAYTEKGIL FNSGDSFPEL DGLDFQAAFD AIDAKLSSEG KGKRQVNYRL
RDWGVSRQRY WGAPIPMVTL ADGTVMPTPE DQLPVILPED VVMDGIQSPI KADKEWAKTQ
VNGQEAFRET DTFDTFMESS WYYARYCSPK ADQMLDPAKA NYWLPVDQYI GGIEHACMHL
LYFRFFHKLL RDIGLVNSDE PAKRLLTQGM VLADAFYYTD DKGARVWVSP NDAKVTETDD
KGRIVKAVDS QGHELVYTGM SKMSKSKNNG IDPQEMVDKY GADTVRLFMM FASPPELTLE
WQESSVEGAH RFIKRLWKLA HDHVSQGPTV ALNVASLDSA QKELRRELHK TIAKVGDDIE
RRQMFNTAIA SVMELMNRLQ KAPMESEQDR ALMQEALCAV VRLLYPIIPH TSFELWQALG
HEETIENVLW PVVDESALVE DSKLIIVQVN GKLRAKVTVA ADADKDTVEA AGMAEEGVIK
HTEGKTVRKV IYVPGKLLNI VAN
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