Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2911 |
Symbol | |
ID | 4921372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 3449202 |
End bp | 3450044 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640164508 |
Product | HemK family modification methylase |
Protein accession | YP_001095036 |
Protein GI | 127513839 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2890] Methylase of polypeptide chain release factors |
TIGRFAM ID | [TIGR00536] HemK family putative methylases [TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.931835 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTCCAGA CGTTAGCACA GGCCCTCGAA TGGGCCTCGA CTCGACTCCA GGATGTGTCT GACAGTGCCA AGCTCGATGC CGAGGTGATG CTGCTGCATA TCATTCATAA GCAGCGCAGT TATCTCTATA CCTGGCCAGA CGAGCGTCTG ACCAGCGAGC AGGTGACCGA GTATAAGCAG ATGGTCGGTC GCCGCGAGTT AGGTACTCCC ATCGCTCACA TCGTCGGCGA ACGGGAGTTC TGGTCGCTGC CCTTCATGGT TAATCCCACC ACGCTGATCC CGCGCCCGGA TACCGAGATT TTGGTAGAGA CAGCCCTTAA TCTGCCGCTG GCGGAGAATG CTAAGGTGCT GGACCTGGGG ACTGGTACCG GGGCTATCGC CCTGTCGCTG GCCTTCGAGC GTAGTAACTG GCAGATCACT GCGGTAGACA AGGTGCTCGA GGCCGTTGCC CTGGCCAAGG CCAACCGTGA CAACCTCAAG TTGCCTCAGG TGGAGGTACT GCAGAGTGAC TGGTTCGACG CCATCAATCG CTACGACTTC AACCTGATCG TCTCCAATCC GCCCTATATC GATGAGGAAG ATGAGCACCT GTCCCAAGGG GACGTGCGTT TCGAACCCCA TAGCGCGCTC ACCGCAGGTG AACACGGCTA TGCGGATCTC TTCTACATCG CCGAGGCGGC GCGCGACTAT CTGGCGCCCG GTGGCTATCT GCTGCTTGAG CATGGTTTCG GCCAGGCTCT TACGGTGCGC GATAAGATGA TCGAGCTGGG TTACGAGGCG GTCGCGACGG TACGCGATTT TGGCAGCAAC GACAGATGTA CCCTGGGTCG CTGGCCAAGA TAG
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Protein sequence | MFQTLAQALE WASTRLQDVS DSAKLDAEVM LLHIIHKQRS YLYTWPDERL TSEQVTEYKQ MVGRRELGTP IAHIVGEREF WSLPFMVNPT TLIPRPDTEI LVETALNLPL AENAKVLDLG TGTGAIALSL AFERSNWQIT AVDKVLEAVA LAKANRDNLK LPQVEVLQSD WFDAINRYDF NLIVSNPPYI DEEDEHLSQG DVRFEPHSAL TAGEHGYADL FYIAEAARDY LAPGGYLLLE HGFGQALTVR DKMIELGYEA VATVRDFGSN DRCTLGRWPR
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