| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2904 |
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| Symbol | |
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| ID | 4921365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3443653 |
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| End bp | 3444501 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640164501 |
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| Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
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| Protein accession | YP_001095029 |
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| Protein GI | 127513832 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
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| TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.867828 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAATA AAACCATAAA GTTAGGTAGC ATTGAAATTG CAAACGACAA GCCTTTTGTC
CTGTTTGGCG GCATGAATGT GCTCGAGTCG CGAGACCTGG CCATGCAGAT CGCAGAGACC
TATGCGGAAG TTACTCAGAA GCTTGGGATC CCTTATGTGT TTAAGGCATC GTTCGACAAG
GCTAACCGCT CTTCGGTGAA CTCTTACCGT GGCCCAGGCA TGGAAGAGGG ACTGAAGATC
TTCCAGGAGA TTAAAGATAC CTTTAACCTG CCGCTGATCA CCGACGTGCA TGAGCCCTAC
CAGTGCCAGC CAGTGGCCGA GGTGGTGGAT ATCATCCAGC TGCCCGCCTT CCTGGCACGT
CAGACGGATC TCGTGGTAGC CATGGCCAAG ACAGGCGCCA TCATCAACGT GAAGAAGCCA
CAGTTCTTGG CGCCCCATGA GATGCGTCAT ATCATCACCA AGTTTAACGA GGCGGGTAAC
GACGAGATCA TCCTATGTGA GCGTGGCTCT TGCTTCGGTT ACAATAACCT GGTGGTTGAC
ATGCTGGGCA TGGATGAGAT GAAGCAGTCG GGTTACCCAG TGATCTTCGA TGCGACCCAC
GCCCTGCAGC GTCCAGGCGG ACGTGCCGAT AGCGCAGGCG GTCGTCGTGC CCAGGCCACC
GAGCTGGCCC GTAGCGGCAT GGCGCTGGGT CTGGCGGGTC TGTTTATCGA GGCGCATCCG
GATCCAGATA ACGCCAAGTG TGACGGCCCA TGTGCCTTGC CACTGCATCA GCTGGAAAAT
TATTTGACCC AGATGAAGGC GATCGACGAT CTGGTGAAAT CTTTCGCCCC AATCGATACC
AGCAAGTAA
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| Protein sequence | MSNKTIKLGS IEIANDKPFV LFGGMNVLES RDLAMQIAET YAEVTQKLGI PYVFKASFDK
ANRSSVNSYR GPGMEEGLKI FQEIKDTFNL PLITDVHEPY QCQPVAEVVD IIQLPAFLAR
QTDLVVAMAK TGAIINVKKP QFLAPHEMRH IITKFNEAGN DEIILCERGS CFGYNNLVVD
MLGMDEMKQS GYPVIFDATH ALQRPGGRAD SAGGRRAQAT ELARSGMALG LAGLFIEAHP
DPDNAKCDGP CALPLHQLEN YLTQMKAIDD LVKSFAPIDT SK
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