| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2880 |
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| Symbol | |
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| ID | 4921852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3419157 |
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| End bp | 3420356 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640164477 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit B |
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| Protein accession | YP_001095005 |
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| Protein GI | 127513808 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1805] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB |
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| TIGRFAM ID | [TIGR01937] NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCTTGA AACAGTTTTT CAAAAGTATT GAACCCCAGT TTGAGAAGGG CGGGAAATAC
GAGAAATGGT ATGCGCTGTT CGAAGCGGCA TACACGGTAT TTTATACCCC AGGTCACGTA
AACAAGGGGC GTACCCATGT GCGTGATAAC TTAGACCTGA AGCGTATGAT GATTACGGTT
TGGGCCTGTG CATTCCCTGC GATGTTCGTG GGTATGTACA ACGTGGGTCT TCAGGCACAA
GATGCCTTGC TCGCTGGCTT TGCGACGCCG GATACCTGGC AAACTGCATT GTTTGGCCTG
TTCGGTACTG AGCTGACGGC TGACTCGGGT GTTGCTGCCC TGATGTGGTA TGGCGCCTGT
TGGTTCCTGC CTATCTACGC GGTGACCTTC GCCGTGGGTG GTATCTGGGA AGTGCTGTTT
GCTACGGTAC GTGGCCACGA AGTTAACGAA GGCTTCTTCG TTACCTCTAT CCTGTTTGCC
CTGACACTGC CGGCAACCAT TCCGCTATGG ATGGTGGCGC TGGGTATCAC CTTCGGTGTG
GTCGTGGCGA AAGAGATCTT CGGTGGTACC GGACGTAACT TCCTTAACCC AGCACTGGCT
GGCCGTGCCT TCCTGTTCTT CGCTTACCCG CTAAACATGT CAGGCGACAC CACTTGGGTG
GTTGCTGACG GTTTCTCTGG TGCGACGGCG CTGAGCCAAG CGGCACAGGG CACACTGGAA
TATGGCTTTA ACCAAGCTTG GTGGGACGCC TTCCTTGGTT TCATCCCAGG TTCTGTTGGT
GAAGTGTCTA CGCTGGCGAT TCTGTTAGGT GGTCTGGTCA TCATCTATAC CCGTATCGCG
TCATGGCGCA TCGTTGGTGG TGTGATGGTC GGTATGATTG CCGTCTCTCT GCTGCTTAAC
GCTATCGGTA GCGACACTAA CCCTATGTTT GCGATGCCTT GGTACTGGCA CATGGTACTG
GGTGGCTTTG CCTTCGGTAT GATGTTCATG GCGACTGACC CAGTTTCTGC GTCTTTCACC
AACCAAGCGA AGTGGGCGTA CGGTATTTTG ATTGGTGCTA TGGCCGTATT CATCCGTGTC
ATTAACCCTG CTTTCCCAGA AGGTATGATG TTGGCCATCC TGTTTGCCAA CCTATTTGCG
CCGCTATTCG ACCACTTCGT GGTTCAAGCG AATATCAAGC GGAGGATTGC TCGTGGCTAG
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| Protein sequence | MGLKQFFKSI EPQFEKGGKY EKWYALFEAA YTVFYTPGHV NKGRTHVRDN LDLKRMMITV
WACAFPAMFV GMYNVGLQAQ DALLAGFATP DTWQTALFGL FGTELTADSG VAALMWYGAC
WFLPIYAVTF AVGGIWEVLF ATVRGHEVNE GFFVTSILFA LTLPATIPLW MVALGITFGV
VVAKEIFGGT GRNFLNPALA GRAFLFFAYP LNMSGDTTWV VADGFSGATA LSQAAQGTLE
YGFNQAWWDA FLGFIPGSVG EVSTLAILLG GLVIIYTRIA SWRIVGGVMV GMIAVSLLLN
AIGSDTNPMF AMPWYWHMVL GGFAFGMMFM ATDPVSASFT NQAKWAYGIL IGAMAVFIRV
INPAFPEGMM LAILFANLFA PLFDHFVVQA NIKRRIARG
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