| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2824 |
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| Symbol | rpsO |
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| ID | 4922494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3348265 |
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| End bp | 3348534 |
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| Gene Length | 270 bp |
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| Protein Length | 89 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640164419 |
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| Product | 30S ribosomal protein S15 |
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| Protein accession | YP_001094949 |
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| Protein GI | 127513752 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0184] Ribosomal protein S15P/S13E |
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| TIGRFAM ID | [TIGR00952] ribosomal protein S15, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.103503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00366524 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTCACTAA GTAAAGAAGT AAAAGCACAA ATCCTGGCTG ATTTCGGTCG TGGTGAAAAT
GACACTGGTT CTACTGAAGT TCAGGTTGCT CTGCTAACTG CACAGATCAA CCACCTACAA
GGTCACTTCA AAGAGCACAT CCATGATCAT CACTCACGTC GTGGTTTGCT TCGCATGGTT
AACTCTCGTC GTAAGCTTCT AGCTTACCTG AAGCGCACTG AAAACGAGCG CTATCAAGAG
CTTATCAAGA AGTTAGGTCT ACGTCGCTAA
|
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| Protein sequence | MSLSKEVKAQ ILADFGRGEN DTGSTEVQVA LLTAQINHLQ GHFKEHIHDH HSRRGLLRMV
NSRRKLLAYL KRTENERYQE LIKKLGLRR
|
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