| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2815 |
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| Symbol | |
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| ID | 4922485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3335827 |
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| End bp | 3336600 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640164410 |
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| Product | deoxyribose-phosphate aldolase |
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| Protein accession | YP_001094940 |
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| Protein GI | 127513743 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0274] Deoxyribose-phosphate aldolase |
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| TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase
[TIGR00148] UbiD family decarboxylases |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00272907 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000280431 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGAGTGATT TAAAAAAAGC AGCACAGAAA GCCATTGAGC TGATGGATCT TACCACCCTG
AACGATGACG ATACCGATCA GAAAGTGATT GAGTTATGTC ATAAGGCTAA GACACCTGCA
GGCAACACAG CTGCAATCTG TATCTATCCT CGTTTTATTC CTATTGCTCG TAAGACCCTG
AATGAAATGG GTTGTGAAGA GATCAAAATC GCTACAGTCA CCAACTTCCC CCATGGTAAC
GATGATATCG CGATCGCCGT GCTAGAGACG CGTGCCGCCG TTGCCTATGG TGCAGATGAA
GTTGACGTAG TATTCCCATA CCGTGCCCTG ATGGAAGGCA ACGAAACTGT AGGCTATGAG
CTGGTTAAAG CTTGTAAAGA AGCCTGTGGT GACGACGTAC TGCTGAAGGT GATCATCGAG
TCTGGCGTAC TGCAAGATCC AGCGCTTATC CGCAAGGCCT CTGAGCTGTC TATCGACGCC
GGCGCCGATT TTATCAAGAC CTCTACCGGT AAAGTGGAAG TAAACGCTAC CTTAGAAGCC
GCCGAGATCA TGATGACAGT AATCGCCGAG AAGAACCCTA AAGTTGGTTT CAAACCAGCC
GGTGGTGTGC GTGATGCCGC GGCCGCAGAA GAGTTCTTAG GTGTCGCTGA GCGTCTGCTA
GGCAAAGGCT GGGCTACTCC ACGTACCTTC CGTTTTGGTG CGTCTAGCCT GCTAAACAAC
CTGCTACACA CCCTGGAATT GGCCGAAGCG CCTAAGGGTC CTCAAGGTTA CTAA
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| Protein sequence | MSDLKKAAQK AIELMDLTTL NDDDTDQKVI ELCHKAKTPA GNTAAICIYP RFIPIARKTL
NEMGCEEIKI ATVTNFPHGN DDIAIAVLET RAAVAYGADE VDVVFPYRAL MEGNETVGYE
LVKACKEACG DDVLLKVIIE SGVLQDPALI RKASELSIDA GADFIKTSTG KVEVNATLEA
AEIMMTVIAE KNPKVGFKPA GGVRDAAAAE EFLGVAERLL GKGWATPRTF RFGASSLLNN
LLHTLELAEA PKGPQGY
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