| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2799 |
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| Symbol | torD |
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| ID | 4922533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3315038 |
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| End bp | 3315673 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640164394 |
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| Product | chaperone protein TorD |
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| Protein accession | YP_001094924 |
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| Protein GI | 127513727 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3381] Uncharacterized component of anaerobic dehydrogenases |
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| TIGRFAM ID | [TIGR00684] nitrate reductase molybdenum cofactor assembly chaperone |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.011442 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATAAGC CATCGATTGA TCAAACACCA GCCAACCAGG CGCGAGCCAG GGTCTACCGC
CTGCTGTCGG ATCTGTTTGC CAAAGAGATA GATCATCAAC GCCTACAGAG CCTGCAAAGC
GCCGAGGCCC AGGCCTTCTT TGACCTGCTA GCCGGCGAGC CTAGGCTGGC GCCTGAAGTG
AATATTATAC AGGAGGTGTT GGCTGAGCTG GGCGATGAGG CCTCCCTACT GAATCTGGCC
GCAGATTATT GCGGCCTCTT CCTGGTAGGC GGCAAGCAGA GCGCCAATCC CTATGCGGGC
CTCTATCTGA CGCCTGAAGG CGATGAGGAG CAGCCGCAGC TGTTCGGCCC TCAGCATCAG
GAGATGCTTG CCCTGCTCAA GCAGAGCAAG CTGGGAGTGC AGAGCGATTT TCCCGAGCCG
GCGGATCATA TCTCAGTGAT CTTGGCCTAT GTCGCCCAGC AGGCCACCAG CCTGGATGAC
AAAGCGCAGC AGCGTTTTAT AGCCAAGTAT CTGGATGCCT GGCTAGCGGA GTTTGCCAAG
CGTGTGAGTG ACAGAGACCC AGGCCGCTTC TATCAGGCCC TCGCCAGGCT CACCCAAATC
TGGGTCAGCC TGGATTGTGA GGCGCTTGGC GCCTGA
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| Protein sequence | MNKPSIDQTP ANQARARVYR LLSDLFAKEI DHQRLQSLQS AEAQAFFDLL AGEPRLAPEV
NIIQEVLAEL GDEASLLNLA ADYCGLFLVG GKQSANPYAG LYLTPEGDEE QPQLFGPQHQ
EMLALLKQSK LGVQSDFPEP ADHISVILAY VAQQATSLDD KAQQRFIAKY LDAWLAEFAK
RVSDRDPGRF YQALARLTQI WVSLDCEALG A
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