Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2790 |
Symbol | |
ID | 4922724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 3299791 |
End bp | 3301146 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640164385 |
Product | nucleoside recognition domain-containing protein |
Protein accession | YP_001094915 |
Protein GI | 127513718 |
COG category | [S] Function unknown |
COG ID | [COG3314] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.727752 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.835537 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTGAAA AACAAACCCA TAACATTAAA ACCGTGCTGA CGTTTCTAGT CCCTTCCATT ATCGGACTGT TACTCTTCAT GACCCCCATT AGCTATCAAG ATGCCATCAC GATCCCCATC GCCATCGTAT CTAAGGGGCT GCAAAATCTA TTGGGCGATA GCATTGTCGC CATCGTCACC GCCATTGTGG TGCTCACCGC TATCGCGACT CTCATCTGCA AAGCGGCAAA ACCCACAATA CTCAATCGCT ATCCCTTCTT TCGTGCCCTG CTCGACGTCA GCCCCATGTG GGCCCTGGTG CGTGTGCTGG GTGCCATCTT CATCGTGCTG ACCTTTACCG GCACTGGGCC CGAGGCGATT CACTCGGGCA ATACGGGCGC ACTGGTGCTC AACGACCTGC TCCCCGTGCT ATTTTGCGTG TTTATCTTTG CCGGCATGTT GCTGCCACTG CTGCTTAACT TCGGCCTGCT GGAGCTGTTC GGCACCCTGC TGACCAAGGT GATGCGCCCT GTGTTCAACC TGCCGGGACG CAGCGCCATC GACTGTATGG CCTCCTGGCT GGGCGATGGC AGCGTCGGTA TTCTGAAGAC CAGTAAGCAA TATGAATCCC GTTTCTACAC CCAGAGAGAA GCGGCGGTGA TCGGCACCAC CTTCTCGGCA GTCTCTATCA CCTTCTCGCT GGTGGTGATC TCTCAGGTTA AGCTCGAGCA CCTGTTCGTG CCCTTCTATC TGACCGTCTG TTTGGCCGGT GTGGTCGCGG CCATCGTTGT GCCTAAGCTG CCCCCGCTCT CTTGGAAGAA AGATCACTAC ATAGATGAGA CCCCACGTCA TCCCGACGAT GAGGTGATCC CTCATGGTAA GGGCGTCTTC GCCTGGGGCT TGGAGCAGGC ACTGACCAAG GCGGCCAAGG CCGAAAGCGT GGGTCATACC CTGAAAGATG GTCTGAAGAA CGTGATCGAC ATGATCTTCG GCGTGATCCC TGTGGTGATG GCCATAGGTA CGGTCGCCCT GATGATCGCC GAATACACGC CTATTTTTAA CTATCTGGGC ATGCCATTCA TTCCACTGCT TGAGCTGCTA CAGGTGCCGG AAGCCGCCGA AGCTTCTAAG ACCATAGTAG TGGGCTTTGC CGACATGTTC ATCCCGTCGA TCCTGGCCAG CTCCATCGAG TCGGACATGA CCCGCTTCAT CATCGCCGCC ATGTCGGTGA CCCAGCTGAT CTACATGAGT GAAGTAGGCG CCCTGCTGAT TGGCAGCAAG ATCCCGGTCA ATATCCTAGA GCTGTTTGTC ATCTTTATCC TAAGAACCCT GGTCACCCTG CCGGTGATCG CAGGTGTCGC CCACCTTATC TTCTAA
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Protein sequence | MAEKQTHNIK TVLTFLVPSI IGLLLFMTPI SYQDAITIPI AIVSKGLQNL LGDSIVAIVT AIVVLTAIAT LICKAAKPTI LNRYPFFRAL LDVSPMWALV RVLGAIFIVL TFTGTGPEAI HSGNTGALVL NDLLPVLFCV FIFAGMLLPL LLNFGLLELF GTLLTKVMRP VFNLPGRSAI DCMASWLGDG SVGILKTSKQ YESRFYTQRE AAVIGTTFSA VSITFSLVVI SQVKLEHLFV PFYLTVCLAG VVAAIVVPKL PPLSWKKDHY IDETPRHPDD EVIPHGKGVF AWGLEQALTK AAKAESVGHT LKDGLKNVID MIFGVIPVVM AIGTVALMIA EYTPIFNYLG MPFIPLLELL QVPEAAEASK TIVVGFADMF IPSILASSIE SDMTRFIIAA MSVTQLIYMS EVGALLIGSK IPVNILELFV IFILRTLVTL PVIAGVAHLI F
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