Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2742 |
Symbol | |
ID | 4922909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 3240013 |
End bp | 3241833 |
Gene Length | 1821 bp |
Protein Length | 606 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640164337 |
Product | peptidase M1, membrane alanine aminopeptidase |
Protein accession | YP_001094867 |
Protein GI | 127513670 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0308] Aminopeptidase N |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.280641 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000071737 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCACCAG CCCTACATCA TAAAAAAGGA ATCCTTGTGG TCACTCAGTG GGATAATCAA CAAGATCATC ATTCATTTGC CAATGTGGAC GCCCTGCGGG TCACGCATTT GAGCCTGGCC CTCGAGGTCG ATTTTGCGGC GCAGCAACTC ATAGGTTGCG CCCGGCTTAA CTTAGATTAT CGCGAGCAAG ATTGCCGTAT CCTCTACTTA GATACCCGCG ACCTCACCAT CACCAGTGTG CTGGACGAGG CTGGCAATGC CTTGGTTTAC CGAGTGGATG AGCAAGATGT GGTGCGCGGT CAGCGACTGG CGATCGAACT GAGCTCGCCA AGTAAACAGG TCACAGTGCA TTATCACACC TCGCCCTCGG CCCAGGGCCT GCAGTGGCTG TCACCTGAGC AGACCAGCGG TAAGCAGTTG CCATTTCTCT TCAGTCAGTC GCAGCCGATC AACGCCCGCA GCTGGATCCC TCTGCAAGAC AGCCCCAAGG CGAGAATTAC CTTCGATGCC AAGATCACTG TGCCGCCTGG GATGCGCGCC GTGATGAGCG CCATGAACCA CGGCGATGCG CCGTTAACGG GTGAATTTAG CTTCGAGATG GAAAAGCCTA TCCCGACCCA TCTGCTGGCG ATTGCCGTTG GGGATCTGCA CTTTGGCGCC ATAGGCCCGC GCACTGGCGT GTATGCCGAG CCCGAGGTGC TATCTGCGGC GGTGAAGGAG TTTGAAGATA CCGAGAAGAT GGTGGAGATC GCCGAGTCCC TGCTAGGCCC CTATGCCTGG GATCGCTACG ACATGCTTAT CCTACCGCCT AGCTTTCCCT TCGGCGGCAT GGAAAACCCA CGACTCGCCT TTATGACCCC CACACTGATC GCTGGCGATA AGAGCCTGGT CTCAACTGTC GCCCACGAGC TGGCCCACTC TTGGACCGGC AATCTGGTGA GTAACGCCAC CTGGCGGGAT CTCTGGCTCA ACGAAGGCTT TACCACCTAT TTCACCAATC GTATCGTCGA GGCCGTGTAT GGCAAGGAGC TGGCCGAACT GGAGGTCGTG TTGGAATATG GCCGCCTCAA GGAGGAGTTG GTGAGCATGC CACTCGAGGC GCAGACCCTG CCGGCCAATG TGCAGGCGGG TGACCCTAAC GATGCCTTTA ACCGCTTCAC CTATGACAAG GCCTCCATGT TTGTTCACGA GCTGGAGCAT CGTCTGGGGC GTGAGGCCTT CGACCGTTTC CTGTTCGAGT ATGTGAATCA TTTTGCCTTC GAGGCGATCA CTACTGAAAC CTTCGTCGAT TACGCCAGAC AGACACTGCT TGTTCAGTAT GGCGATAAGA TAACCGAGGC CGAGTTGCTC GAGTGGGTCT ATGGCGAGGG GATGCCCGCC TGGTTCGTGC CGCCTAGCTC AGACAGCCTG GAGAAGGTCG ATGCCCTACG CGCCGCCTGG CTCGGTGGCG AGCCTATCAA TAAGGCCAAC ACGGCCAATT GGCGGGTGCA CCACTGGCAG TATTTCCTAA ATAGCCTGCC CGAGGTGCTC GAGCAAGAGG CGTTGATCGA CTTGGATACC AGCTTCGATT TCAGCCGCAG CACTAATGCC GAGATCGCCT GTGACTGGTA TCGGGTCGCC ATACGTAATC ATTACGATCC CGTACTGCCC TTCGTCGAGG CTTATCTGAT GAAAATAGGG CGGGGGAAGT TTGTGCGTCC CCTGTATAAC GAGTTGCTGC TGGCCGGATA TGGCGAGGAG CTGCGTCGCA TCTATCAGAA GGCGAGGGCG GGTTATCATC CTTCGCTGTC GGTGCAGCTG GATAAGCAGC TATTGCAGTA A
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Protein sequence | MAPALHHKKG ILVVTQWDNQ QDHHSFANVD ALRVTHLSLA LEVDFAAQQL IGCARLNLDY REQDCRILYL DTRDLTITSV LDEAGNALVY RVDEQDVVRG QRLAIELSSP SKQVTVHYHT SPSAQGLQWL SPEQTSGKQL PFLFSQSQPI NARSWIPLQD SPKARITFDA KITVPPGMRA VMSAMNHGDA PLTGEFSFEM EKPIPTHLLA IAVGDLHFGA IGPRTGVYAE PEVLSAAVKE FEDTEKMVEI AESLLGPYAW DRYDMLILPP SFPFGGMENP RLAFMTPTLI AGDKSLVSTV AHELAHSWTG NLVSNATWRD LWLNEGFTTY FTNRIVEAVY GKELAELEVV LEYGRLKEEL VSMPLEAQTL PANVQAGDPN DAFNRFTYDK ASMFVHELEH RLGREAFDRF LFEYVNHFAF EAITTETFVD YARQTLLVQY GDKITEAELL EWVYGEGMPA WFVPPSSDSL EKVDALRAAW LGGEPINKAN TANWRVHHWQ YFLNSLPEVL EQEALIDLDT SFDFSRSTNA EIACDWYRVA IRNHYDPVLP FVEAYLMKIG RGKFVRPLYN ELLLAGYGEE LRRIYQKARA GYHPSLSVQL DKQLLQ
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