Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2741 |
Symbol | |
ID | 4922908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 3238632 |
End bp | 3239120 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640164336 |
Product | glutathione peroxidase |
Protein accession | YP_001094866 |
Protein GI | 127513669 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0386] Glutathione peroxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000260986 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000615291 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCGATTT ACGATTTTTC ACTCACCCGC ATCGATGGCA GCACCCAGCC GATGGCGGAT TACAAAGGTA AGGTACTGCT TATCGTCAAC ACGGCCAGCA AATGTGGATT CACCCCTCAA TATCAGGCGC TACAGGCGCT GTATGAGCAG TTCGGCCCTG AGCGTTTTGC CGTGCTCGGC TTCCCCTGCA ACCAGTTTGG TCAGCAGGAG CAGGGGGATG AGAGCGAGAT CAGTCAGTTC TGCGAGCTTA ACTTTGGCGT CAGCTTCCCG CTCTTTGCCA AGATAGAGGT AAACGGCGAC AAGGCTCATC CTCTGTATCG TTACCTCAAG CGCGAGGCCA AGGGGGTGCT TGGCAGCGAA TCGATCAAAT GGAACTTCAC CAAGTTCCTG GTCGACGGAC ACGGATGTGT ACTGGAACGC TTCGCTCCCA CCACAAAACC TGAATCTTTG GCAGAAAAAA TCGCTGCTTT AGTGAGCCAA TCCAAATAG
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Protein sequence | MSIYDFSLTR IDGSTQPMAD YKGKVLLIVN TASKCGFTPQ YQALQALYEQ FGPERFAVLG FPCNQFGQQE QGDESEISQF CELNFGVSFP LFAKIEVNGD KAHPLYRYLK REAKGVLGSE SIKWNFTKFL VDGHGCVLER FAPTTKPESL AEKIAALVSQ SK
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