Gene Shew_2741 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2741 
Symbol 
ID4922908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3238632 
End bp3239120 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content53% 
IMG OID640164336 
Productglutathione peroxidase 
Protein accessionYP_001094866 
Protein GI127513669 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0386] Glutathione peroxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000260986 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000615291 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGATTT ACGATTTTTC ACTCACCCGC ATCGATGGCA GCACCCAGCC GATGGCGGAT 
TACAAAGGTA AGGTACTGCT TATCGTCAAC ACGGCCAGCA AATGTGGATT CACCCCTCAA
TATCAGGCGC TACAGGCGCT GTATGAGCAG TTCGGCCCTG AGCGTTTTGC CGTGCTCGGC
TTCCCCTGCA ACCAGTTTGG TCAGCAGGAG CAGGGGGATG AGAGCGAGAT CAGTCAGTTC
TGCGAGCTTA ACTTTGGCGT CAGCTTCCCG CTCTTTGCCA AGATAGAGGT AAACGGCGAC
AAGGCTCATC CTCTGTATCG TTACCTCAAG CGCGAGGCCA AGGGGGTGCT TGGCAGCGAA
TCGATCAAAT GGAACTTCAC CAAGTTCCTG GTCGACGGAC ACGGATGTGT ACTGGAACGC
TTCGCTCCCA CCACAAAACC TGAATCTTTG GCAGAAAAAA TCGCTGCTTT AGTGAGCCAA
TCCAAATAG
 
Protein sequence
MSIYDFSLTR IDGSTQPMAD YKGKVLLIVN TASKCGFTPQ YQALQALYEQ FGPERFAVLG 
FPCNQFGQQE QGDESEISQF CELNFGVSFP LFAKIEVNGD KAHPLYRYLK REAKGVLGSE
SIKWNFTKFL VDGHGCVLER FAPTTKPESL AEKIAALVSQ SK