| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2734 |
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| Symbol | |
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| ID | 4922930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3231868 |
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| End bp | 3232251 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640164329 |
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| Product | 4-carboxymuconolactone decarboxylase |
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| Protein accession | YP_001094859 |
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| Protein GI | 127513662 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
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| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR02425] 4-carboxymuconolactone decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.888805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000628107 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATAAGG CCAAGTATGA TCAAGGGTTA GCCATTAGGC GCGAGGTGAT GGGCGATAGT
TTTGTCGACA GGGCGCTGTC GTCGGCCAGC GATTTTACCC AGCCCCTGCA GGAGCTGGTG
ACCCGCAACG CCTGGGGCGA GGTGTGGGCC AGAGAGGGAC TCGACAGACG CACCCGCAGC
CTGATCACCA TAGCGACCCT GGCCGCACTC AAGGCCTCCA CCGAACTCAA GGGCCATGTG
CGCGGCGCGC TACGTAACGG CTGCACCGTC GAAGAGATCC AGGAGGTGCT GCTGCATTCC
ACCGTCTACT GCGGCATGCC AGCTGGGGTT GAGGCGTTTC GCGCCGCCAA TGAGGTGATT
TCGGAGTGGC AGGAAGGGGA GTAG
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| Protein sequence | MDKAKYDQGL AIRREVMGDS FVDRALSSAS DFTQPLQELV TRNAWGEVWA REGLDRRTRS
LITIATLAAL KASTELKGHV RGALRNGCTV EEIQEVLLHS TVYCGMPAGV EAFRAANEVI
SEWQEGE
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