Gene Shew_2639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2639 
Symbol 
ID4924117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3115199 
End bp3115543 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content47% 
IMG OID640164234 
Producthypothetical protein 
Protein accessionYP_001094764 
Protein GI127513567 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0373938 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.51318 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAGT TACTAACGAT TGCCGCCATC GCATTAGCCC CACTGGCTTT TTCTTCTCAA 
GCCGCCATGT CGCCTCAGAT GGAAAAAACC TTAGTTGCCG TATGCAAAGC CGGCGCAAGC
AACAGCATTA TTGAATTTAA CGGTACGATG AAAGAATATC GCATCAACAA ACAACGCGTC
TTCCCTCGCC TTGTGTGCAA TGACCAGAGC TTCCATCAGT TTGCTCTGAG CAACGGCGCC
GATCGCACTG CCGCTAAGAT TGAACGCTAC AGCTTAGGTA CAGTGACCAT TAAAGATCTC
GCCATGAACT ATGGTGACGA AGAGATTTTA GCCGTTAACT TCTAA
 
Protein sequence
MRKLLTIAAI ALAPLAFSSQ AAMSPQMEKT LVAVCKAGAS NSIIEFNGTM KEYRINKQRV 
FPRLVCNDQS FHQFALSNGA DRTAAKIERY SLGTVTIKDL AMNYGDEEIL AVNF