| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2631 |
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| Symbol | |
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| ID | 4923893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3106357 |
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| End bp | 3107148 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640164225 |
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| Product | undecaprenyl diphosphate synthase |
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| Protein accession | YP_001094756 |
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| Protein GI | 127513559 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
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| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000342439 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.527492 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAATCG AATCTCAATC TGGCTCTGAG TTATCTAATG AAGCACTCGC AGAGCTGGTA
AAACAGTCTA TTCCCAAGCA CGTGGCGATC ATCATGGATG GCAACGGGCG CTGGGCACAG
GCACAGGGCA AGCCCCGTGT TGTGGGCCAC AAGGCCGGTG TAAAGACTGT TCGCCGTGCG
GTGAGTATGG CGCGTGAGAT GGGGATAGGT TCGTTAACCC TGTTTGCGTT TTCCAGTGAA
AACTGGCGCA GACCCGAGAA AGAAGTCAGC CTCCTGATGG AGCTGTTTTT CACCGTTTTA
CAACGAGAAA TAAAACTACT GGATAAAAAC GGGGTCAGGC TCAACATCAT AGGGGACATC
AGTCGTTTTT CTGCCCGCTT ACAAAAGCAG ATCGCCGCGG CGATGGAGAA GACGGCCAAC
AACACTGGTT TGATCCTCAA TGTGGCGGCC AACTACGGCG GTCGCTGGGA CATAGTGCAG
GCGGCGCAAA CCTTAGCCAA AAAGGTGGAA TCTGGCGAAA TGACCAGCAG TCAGTTCACC
GAGGAGGCGC TAAGTCAGCA TTTAAGCATG CAAAATCAAC CGGAAGTTGA TTTAATGATT
CGCACCGGTG GCGATTTTCG CATTAGTAAC TTTGTGTTAT GGCAAGCGGC TTACGCAGAG
TTAGTGTTTA CTGATGTGTT GTGGCCAGAT TTTGATGAAC AGGCCTTTAA AGATGCGGTA
GCCGTATTTG CTACCCGGCA GCGCCGTTTT GGATTGACGG GTTCTCAAAT TGAGACTTTG
CAGGCTGAGT AA
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| Protein sequence | MSIESQSGSE LSNEALAELV KQSIPKHVAI IMDGNGRWAQ AQGKPRVVGH KAGVKTVRRA
VSMAREMGIG SLTLFAFSSE NWRRPEKEVS LLMELFFTVL QREIKLLDKN GVRLNIIGDI
SRFSARLQKQ IAAAMEKTAN NTGLILNVAA NYGGRWDIVQ AAQTLAKKVE SGEMTSSQFT
EEALSQHLSM QNQPEVDLMI RTGGDFRISN FVLWQAAYAE LVFTDVLWPD FDEQAFKDAV
AVFATRQRRF GLTGSQIETL QAE
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