| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2619 |
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| Symbol | |
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| ID | 4920718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3090549 |
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| End bp | 3091973 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640164213 |
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| Product | tRNA(Ile)-lysidine synthetase |
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| Protein accession | YP_001094744 |
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| Protein GI | 127513547 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
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| TIGRFAM ID | [TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain
[TIGR02433] tRNA(Ile)-lysidine synthetase, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCCCG ACAGCTTCTG TCCATTTGAT GCCCTGACCC AGCTACTAGC GCGGGTGAAG
CCTGCGGCTG GCATTAATTC TGGTAGTAGG CCAGCTACTA AGCCAGCTAT GAAGTTAGTA
CTGGCATATA GTGGCGGGGT CGACTCAGAG GTGCTTGCCC ATGGCCTGAG CCTATTTGCC
AAGCAGCATC CCGAGTTTAA TTATCTCCTG GTGCATGTGC ATCATGGCCT CAGCGCCAAT
GCTGATAGCT GGCAGAGCCA CTGTGAGCGC CGTGCCCGCG AGTATGGCTT GCCGATCAGC
GTCAAGCGGG TGACAGTGGC TAGTGGCGCC CGCATTAGTC TCGAGGCCGC GGCCCGCGAG
GCGAGATACG ATGCGCTGCG AAGCGAGTTA GCCCCCGGCG ATATCCTGCT CACCGCCCAT
CATCAGGACG ATCAGTTAGA GACGCTATTA CTGGCCCTCA AGCGTGGCCT CGGGCCCAAG
GGACTGGCGG CCATGGGAGA GGTGCAGGCC TTTACCCCTG ATAATCCACT CCTCAGGCCT
CTGCTGACAA GCTCCCGCGC CCAGATAGAA GCCTTCGCCA TGGCTGAAGG GCTTAGCCAT
ATCGAGGATG AGAGTAATAA GGACAGTCGT TTCGACCGCA ACTTTTTGCG CAATGAGGTG
CTGCCGATCC TCACGGCGCG CTGGCCAGCC TTTGCCGCCA CCGCCAGTCG CAGCGCTCAA
TTGTGCGCCG AGCAGCAGGC GTTGATCGAC GAGGAGGTGA GTCTTTGCTT ACCTGCCATG
CTGCTAAGCG TGCCCCATAG TCAGGCGGCC GTGCTGGATC TTAAGGCGCT AGCAGAGCAG
CCTGGGCGCT GGCGTCCCCA TCTGCTGCGG GGCTTTATCG AGCATCGCGG CTTCCCTTTA
CCCTCGGCGG CGCAGCTGGG GGATATTTTG GCGCAGCTTG AGGCTAAAGA CGATGCTCAG
GTGGCGATTC GCATCAGATC TATGGTGCTG AGACGTTTTC AATACGCGCT CTATCTTGAT
CCTGTCGAGG TCGCCCCCAG AGTTGAGCAA GTGCTGCAAG GCCTGGATGA GGATGTGAGA
TCCCATGGCT CGACGTTAAG CTGGCCTATC GATAGCCAAA GCCAGCTTGT GGCGAACTGG
AGCCTGACGG GCCCTAGGCT ACGTCTAGCA AAGGCAGGCG AGGTGATGCT TCGTTTTGGC
GCCTCTGGCA GCCTGCGCTG TCATCCCCAT GGGCGGGATA AGGGGCGGGA GCTTAAGAAG
TTGTGGCAAG AGTTTGCCGT GCCGCCTTGG GAGCGAGGGC GTATTCCGCT TATCTTTTCT
GGCGAGCAAT TAGTTGCCGC TGTGGGGCTC TGGGTGGATA AACGTTACTT GGCTGATGAA
GGCGAGGGCG GCTGGCAGTT CAGCCTTGTC GAAGTTAATA CCTAA
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| Protein sequence | MAPDSFCPFD ALTQLLARVK PAAGINSGSR PATKPAMKLV LAYSGGVDSE VLAHGLSLFA
KQHPEFNYLL VHVHHGLSAN ADSWQSHCER RAREYGLPIS VKRVTVASGA RISLEAAARE
ARYDALRSEL APGDILLTAH HQDDQLETLL LALKRGLGPK GLAAMGEVQA FTPDNPLLRP
LLTSSRAQIE AFAMAEGLSH IEDESNKDSR FDRNFLRNEV LPILTARWPA FAATASRSAQ
LCAEQQALID EEVSLCLPAM LLSVPHSQAA VLDLKALAEQ PGRWRPHLLR GFIEHRGFPL
PSAAQLGDIL AQLEAKDDAQ VAIRIRSMVL RRFQYALYLD PVEVAPRVEQ VLQGLDEDVR
SHGSTLSWPI DSQSQLVANW SLTGPRLRLA KAGEVMLRFG ASGSLRCHPH GRDKGRELKK
LWQEFAVPPW ERGRIPLIFS GEQLVAAVGL WVDKRYLADE GEGGWQFSLV EVNT
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